Streptomyces nodosus: CP978_10200
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Entry
CP978_10200 CDS
T06839
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
snq
Streptomyces nodosus
Pathway
snq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP978_10200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_10200
Enzymes [BR:
snq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CP978_10200
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CP978_10200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QEV43190
UniProt:
A0A5P2WB16
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All DBs
Position
2244498..2245355
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AA seq
285 aa
AA seq
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MPRNPIGGHVPVAGGLNSVGLAYAHDLGAETVQVFVANPRGWATPAGDPRQDEAFRAACA
DGAVPAYVHAPYLINFGSHTEATVEKSVASLRHSLRRGRAIGALGVVVHTGSATGGRERA
VALEQVRERMLPLLDELTHDDDPYLLLEPTAGQGASLCSRVPDLGPYFEALDAHPKLGVC
LDTCHVFAAGHDLTGPNGMHRTLDLLVDTVGTGRLKLIHANDSQDVVGAHKDRHANIGSG
HIGEDPFRALMTHPATEGVPLVIETPGGKEGHTADVERLKKLRDG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcaatcccatcggcgggcatgtgcccgtggccggcgggctgaactccgtcggg
ctcgcctacgcacatgacctcggcgccgagaccgtacaggtctttgtggccaatccgcgc
ggctgggcgaccccggccggcgatccccggcaggacgaggcgttccgcgcggcgtgcgcc
gacggggccgtaccggcctatgtgcatgcgccgtatctgatcaacttcggttcgcacacc
gaggcgaccgtggagaagtccgtggcgtccctgcggcactcgctgcgccggggccgtgcg
atcggggcgctgggcgtcgtcgtgcacaccggcagcgccaccggcgggcgggagcgggcc
gtcgcgctggagcaggtgcgcgagcggatgctcccgctgctggacgagctgacgcatgac
gacgacccgtatctgctgctggagccgacggcggggcagggcgcctccctgtgctcgcgc
gtcccggacctcgggccgtacttcgaggccctggacgcgcatcccaagctgggcgtctgc
ctggacacctgccatgtcttcgccgccgggcacgacctgaccgggccgaacgggatgcac
cggacgctggatctgctggtggacaccgtcggcacgggacggctgaagctgatccatgcc
aatgactcccaggacgtggtgggcgcccacaaggaccggcacgccaacatcggctccggc
cacatcggggaggacccgttccgcgcgctgatgacccatccggcgaccgagggcgttccg
ctggtcatcgagacacccggtggcaaggaggggcacacggcggatgtggaacggctgaag
aaactccgcgacggctga
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