Streptomyces nodosus: CP978_12725
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Entry
CP978_12725 CDS
T06839
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
snq
Streptomyces nodosus
Pathway
snq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP978_12725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_12725
Enzymes [BR:
snq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP978_12725
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP978_12725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
PIF1
Helicase_RecD
AAA_16
NPHP3_N
PhoH
nSTAND3
TraI_hel_assoc_N
TrwB_AAD_bind
AAA
DEAD
ABC_tran
NACHT
UvrD_C
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QEV39314
UniProt:
A0A0B5DHX3
LinkDB
All DBs
Position
complement(2809911..2812190)
Genome browser
AA seq
759 aa
AA seq
DB search
MNKEAARAEQSGGGERRPAVLEGVLERITYANEENGWTVARVDTGRGAADLLTVVGALLG
AQVGESLRMEGRWGSHPQYGKQFTVENYTTLLPATVQGIRRYLGSGLVKGIGPVFADRIT
QHFGLDTLRIIEEETGRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAV
RIYKKYGDASISVVKNQPYRLASDVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQ
STDQGHCFLPEERLIADAVKLLQVDTGLVIECLAELATPPEDGGDPGVVREKVPGPDGGS
GPVTALYLVPFHRAELSLSAQLLRLLRTEEDRMPSFRSVVWDKALGWLKGRTGADLAPEQ
EAAVKLALTEKVAVLTGGPGCGKSFTVRSIVELARARKAKVVLAAPTGRAAKRLSELTGA
EASTVHRLLELKPGGDAAYDRDRPLDADLIVVDEASMLDLLLANKLVKAVPPGAHLLFVG
DVDQLPSVGAGEVLRDLLADGGPVPAVRLTRVFRQAQQSGVVTNAHRINSGQHPLTDGLK
DFFLFVEDDTEAAGRLTVDVAARRIPARFGLDPRRDIQVLAPMHRGPAGAGTLNGLLQQA
ITPARPDLPEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTSLDPVDQRLTVLT
DEDEEVPYDFDELDELAHAYAVTIHRSQGSEYPAVVVPVTTGAWMMLQRNLLYTAVTRAK
KLVVLVGSRKAIGQAVRSVSAGRRCTALDFRLSPRPLDG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaggcggcccgggcggagcagtcgggcggcggggagcggcgcccggccgtg
ctggaaggcgtgttggagcgcatcacctacgcgaacgaggagaacggctggacggtcgcc
cgcgtcgacaccggcagaggcgccgccgatctgctcacggtcgtcggcgcgctgctcggc
gcgcaggtcggcgagtccctgcggatggaggggcgttgggggtcccaccctcagtacggc
aagcagttcaccgtcgagaactacacgaccctgctgcccgccaccgtccagggcatccgt
cgctatctgggctccggcctggtcaagggcatcggacccgtcttcgccgaccgcatcacc
cagcacttcggcctcgacaccctgaggatcatcgaggaggagaccgggcggctcatcgag
gtcccggggctcggtcccaagcggaccaagaagatcgccgacgcctgggaggaacagaag
gcgatcaaagaagtgatgctcttcctccagaccgtcgaggtctccacctccatcgccgtg
cggatctacaagaagtacggggacgcctcgatctccgtggtgaagaaccagccgtaccgg
ctcgcctccgatgtctggggcatcggctttctgaccgccgacaagatcgcccaatccgtg
gggatcccgcacgacagcccggagcgggtcaaggcggggctgcagtacgcgctgtcccag
tccaccgaccaggggcactgctttctgcccgaggagcggctgatcgcggacgccgtcaag
ctgctccaggtggacaccggcctggtcatcgaatgcctggccgagctggcgacgcccccg
gaggacggcggtgaccccggcgtcgtacgggagaaggtgcccggtcccgacggcggctcg
ggcccggtcaccgccctctatctggtgcccttccaccgtgccgaactgtccctctccgcc
cagctgttgcggctgctgcggacggaggaggaccggatgccctcgttccgctccgtcgtc
tgggacaaggcgctgggctggctcaagggccgcaccggcgccgacctcgcccccgagcag
gaggccgccgtcaagctggcgctgaccgagaaggtcgccgtgctgaccggcggccccggc
tgcggcaagtccttcacggtgcgctcgatcgtggagctggcccgcgccaggaaggcgaag
gtcgtgctggccgcgcccaccggacgggccgccaagcggctctccgagctgaccggcgcc
gaggcctccaccgtccaccggctgctggagctgaaacccggcggcgacgcggcctacgac
cgggaccgcccgctggacgccgatctgatcgtcgtcgacgaggcgtccatgctcgatctg
ctgctcgccaacaagctggtgaaggccgtaccgccgggcgcccatctgctcttcgtcggc
gatgtcgaccaactgcccagcgtgggcgcgggggaggtcctcagggatctgctcgccgac
ggcggccccgtccccgccgtccgtctcacccgtgtcttccgccaggcccagcagtccggc
gtggtcaccaacgcacaccggatcaactccgggcagcaccccctcaccgacggcctcaag
gacttcttcctcttcgtcgaggacgacaccgaggcggccggccggctcaccgtggacgtg
gcggcacggcggatcccggcccgcttcggccttgacccgcgccgggacatccaggtgctg
gcgcccatgcaccgggggcccgccggtgcgggcaccctcaacggactgctccagcaggcg
atcacccccgcccgccccgacctgcccgagaagcgcttcggcggccgggtcttccgggtc
ggcgacaaggtcacccagatccgcaacaactacgagaagggggagaacggcgtcttcaac
ggcaccgtcggcgtggtcacctcgctggacccggtcgaccagcgcctgaccgtgctgacg
gacgaggacgaggaggtcccctacgacttcgacgaactggacgagctggcgcacgcctac
gcggtgaccatccaccgctcccagggcagcgagtatccggcggtggtcgtcccggtgacc
accggagcctggatgatgctccagcggaacctgctctacacggcggtcacccgcgcgaag
aagctggtcgtcctcgtcggatcgcgcaaggcgatcggacaggcggtgcgttcggtctcg
gcgggccggcgttgcacggccctggacttcaggctctcgccgaggcccctcgacggctga
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