Streptomyces nodosus: CP978_15085
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Entry
CP978_15085 CDS
T06839
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
snq
Streptomyces nodosus
Pathway
snq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP978_15085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snq03021
]
CP978_15085
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_15085
Enzymes [BR:
snq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP978_15085
Transcription machinery [BR:
snq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP978_15085
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP978_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QEV39700
UniProt:
A0A0B5DD63
LinkDB
All DBs
Position
complement(3349737..3350753)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRVPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGVHSVGELLARSEADLLDIRNFGAKSIDEVKAK
LAGLGLALKDSPPGFDPTAAAFDADDNASTGFVETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactctcttcgccgt
accctcctgtcgtcgattccgggtgctgctgtcaccagcatccgtgtcgacggcgttctg
cacgagttcaccaccgtgccgggcgtgaaggaggatgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtggtgatgtatctgcgtaagcag
ggtccgggtctggtcaccgccgcggacatcgcgcctccggccggtgtcgaggtgcacaat
cccgatcttgtcctggccacgctgaacggcaagggcaagctggagatggagctgaccgtg
gagcgcggtcgtggttatgtctccgcggtgcagaacaagcaggtgggtcaggagatcggc
cgggtgccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcg
acccgtgtcgagcagcgtacggacttcgacaagctgatcgtcgatgtggagaccaagcag
gccatgcgtccgcgggatgccatggcgtccgcgggcaagacgctggtggagctgttcggt
ctggcgcgcgagctgaacatcgatgccgagggcatcgacatgggtccgtccccgacggat
gccgccctggccgccgatctggcgctgccgatcgaggagctggagctcacggtccgctcc
tacaactgcctcaagcgcgagggggtccattcggtgggtgagctcctggcccgctccgag
gccgatctgctggacatccgtaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcctgggtctggccctcaaagacagcccgcccggattcgacccgaccgccgcc
gccttcgacgcggacgacaacgcgagcacaggtttcgtggagaccgagcagtactga
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