Streptomyces nodosus: CP978_16830
Help
Entry
CP978_16830 CDS
T06839
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snq
Streptomyces nodosus
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snq03021
]
CP978_16830
Transcription machinery [BR:
snq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP978_16830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
DUF7343
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
QEV39992
UniProt:
A0A0B5DLU1
LinkDB
All DBs
Position
3727780..3728691
Genome browser
AA seq
303 aa
AA seq
DB search
MSAEQGSSKVLTLMPSDSATDVLQDLQAPQDLPGAETLPAPEAQDLPSSEAIDTRTLSRS
LFLRLAALDDNSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAID
RFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRS
PTVTELATALGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDSALEGV
EYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGDEVGISQMHVSRLLTRTLAQLREGL
ISD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcatgccgagcgactccgcgacc
gacgtgctccaggaccttcaggcccctcaggacctcccgggtgccgagacccttccggcc
cccgaggcccaggaccttccgtcctccgaggccatcgacacccgcaccctgtcccgctcc
ctcttcctgcggctcgccgcactcgacgacaacagcccggagcgtgcctacgtccgggac
acgctcatcgagctgaacctcccgctggtgcgctacgcagccgcgcgcttccgcagccgc
aacgagccgatggaggacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgac
cgcttcgactgcgaacggggcgtggaattcccgacgttcgcgatgccgaccgtcgtcggc
gagatcaagcggttcttccgggacacctcgtggtcggtgcgggtgccgcgccgcctccag
gagctgcggctggccctcaccaaggccagcgacgagctctcgcagaagctggaccgctcg
ccgacggtcaccgaactcgccaccgcgctcggggtgtcggaggaggacgtggtcgacggg
ctggccgtcggcaacgcgtacacggcctcctcgctggactccccggcccccgaggacgac
ggcggcgagggctccctcgcggaccgcctcggctacgaggactcggccctggagggcgtg
gagtaccgcgagtccctcaagccgctgctggccaaactcccgccccgcgagcggcggatc
atcatgctgcgcttcttcgccaacatgacgcagtcgcagatcggcgacgaggtcggcatc
tcacagatgcatgtctcccggctgctcacccgcaccctggcgcagctgcgggagggcctg
atctcggactga
DBGET
integrated database retrieval system
