Streptomyces nodosus: CP978_16905
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Entry
CP978_16905 CDS
T06839
Name
(GenBank) PAS domain-containing protein
Organism
snq
Streptomyces nodosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
FBF1
HisKA
Motif
Other DBs
NCBI-ProteinID:
QEV40003
UniProt:
A0A5P2W842
LinkDB
All DBs
Position
3742216..3746637
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AA seq
1473 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFEAPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDSTDANGRTKPTRMTARRTDGIEFPVEVTSANLEDGRQAYDGSGYT
GDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAAQIL
GFRASDLGGKELHTLVLHSREDGSPFPYTESPLHDTLRSGRKHRVRGQVLWSKSGDKVSV
DLTTAPVRDGDQLVGAVMTFTDRRPFDALAAEKDEADKQHEKDLEHAAEEREEELKRLRE
EHAAELTELRERHTEEIAAGDERYAALGEREKDRYEALSARHEQLLAVLDQSLRGPLDQL
RAELSKLASDDAGQLWPEANQVLHHLAAGYSRITTLIDNVLGFQRLDAGDDGLARTAVML
DAVVAAGVEGAIELVGPGRVQFAVHAPPIEAEVDPRRLAQALAHLVADVAGVDSTGNAPV
SAGGYMDSTVVVAAAQRGESVRIEVRGPYAGGDPVHQPIVAGIVRAHGGVLQTHEVPGMS
GNAYVLEVPIGSGAGTVTAVPAEVPAELSETPTEQPGAEVALADQAAPQGGGRRRARRSS
VDAFLDSEAADPAASPEAAPVPPTGRRRRRAAEGPAETSIPAQATAAEIPADSSGTGRRR
GRPGSGGNGAGGVSEGSVMTSAEHSAQPAPTGLGETVPPGGVPVPSGGRARQDGEPHALP
PALPAASTAPTPDAAGAAPAPTGRRRRALGAANERPAAAQSGPRPMFALPPAAADRAPEQ
PVPVPLPADAGRHDAVPHEQSEDHTPPQPHPVSAPTGRRRARSVTAPAQPPAGAAAPSPI
PAEGMPAQPAPPQAPPVQRTPAMPAPVVPGQEGRQPLPAPALPAPAVPAQSVPPQGLPPQ
GAPGGLVAPGHPVPAPSAPGAQPVPAVQPQPAPTGQPLPMPPGQPAPSAQPVPAVQAQPA
PTGQPLPVAPGQPMPAGQPVPVAPEPPVPTGRPLPAQPLLPGEPVTAPRPAAPAQPGPQP
VPAPAPSVGGLPAAAAPAPGTPASPGAWPATGDTSGAGMPLPGLTPPAGTPLPPERAVPP
RAAQPLPAETDLPVDPNSTQGRAISVRTLGQGVPFTRQGAQPQAQPRPQSPTPPPHQSNG
SGRRRKLGTPPEPPGERAETTARPHPGTASIPLPAQPPLPGQGRPSVATEGAGRSYAIGA
PDKNADEGPEPLDGPGGAVEIADQPQSRPLDDELPPEPLDNPRRLLVWPAPDVTTQQALS
DRGYRPVIVNSREDVDAQIAAFPAALFVDPLTGPITRTALQSLRQAAVAAEVPVLVTAGL
GQATREAAYGADPAVLLKALAPRDSEQHPPRVLLIEEHAEIALALTATLERRGMQVARAA
SDADAVTLAAQMRPNLVVMDLLQVHRRQAGVVDWLRANNLLNRTPLVVYTATIGQADLPR
LVSGETVLFLAERSTTAEVQDRIVDLLARIGTN
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgctgccatactggatgctctcccc
gacgcgttggtactggtcaacgccaacgggaccgtggtcaacgccaacaccatcgccctg
gaggccttcgaggcgcccgggaccgccctggtggggcgcgggctcctcgatctgctgccc
gagttcgactcacggctgatccccgggtccatgcggcggcccgactccaccgacgccaac
gggcggaccaagccgacgcggatgaccgcccgccgcacggacggcatcgagttccccgtc
gaggtcacgagcgccaacctcgaggacggccggcaggcgtacgacggctccggctacacc
ggcgacgaactgctgatgctggtcgtccgtgatctgtccgggaccgtggacaccgaggcc
gaactcgcccgctcccagcgtcagaccgagatgatcctgcgggccgcgtccgagggcgtg
gtgggcaccgacacggacgggcggatcgtgctggtcaacccggccgccgcccagatcctc
ggattccgcgccagcgatctgggcggcaaggagctgcacacactggtgctgcactcccgc
gaggacggctcgcccttcccgtacacggagtcgccgctgcacgacaccctgcgttccgga
cgcaagcaccgggtgcgcggccaggtgctgtggtcgaagagcggcgacaaggtttcggtc
gatctgacgacggcgccggtacgcgacggcgaccagctcgtcggcgccgtgatgaccttc
acggaccggcgcccgttcgacgcgctcgccgcggagaaggacgaagccgacaagcagcac
gagaaagacctcgaacacgccgccgaggaacgcgaggaggagctgaagcggctgcgcgag
gagcacgccgccgagctcaccgagttgcgcgagcggcacacggaggagatcgcggccggt
gacgagcgctacgccgcactcggcgagcgcgagaaggaccgctacgaggcgctgagcgcc
cggcacgagcaactgctcgcggtactggaccagtcgctgcgcggccccctcgaccagctg
cgcgccgagctgtccaagctcgcctcggacgacgcgggccagctgtggcccgaggccaac
caggtgctccaccacctcgccgccggctactcgcgcatcaccaccctcatcgacaacgtc
ctcggcttccagcggctggacgccggcgacgacgggctggcacggacggccgtcatgctc
gacgcggtcgtcgccgccggtgtcgagggcgccatcgagctggtggggcccggccgtgtg
cagttcgccgtccatgccccgcccatcgaggccgaggtcgacccccggcggctggcgcag
gcgctcgcgcacctcgtcgcggatgtcgcgggcgtcgactcgacgggcaacgctcccgtg
tcggcgggcggttacatggacagcaccgtcgtcgtggcggccgctcagcgcggcgagtcc
gtccggatcgaggtgcgcggcccgtacgccgggggagacccggtgcaccagccgatcgtc
gcgggcatcgtgcgtgcgcacggcggtgtgctgcagacccacgaggtaccgggcatgagc
ggcaacgcctatgtgctcgaggtgccgatcggcagcggtgccgggacggtcacggcagtg
ccggccgaggtccccgccgagctgtcggagacccccacggagcagcccggggccgaggtc
gcactcgccgaccaggccgcaccgcagggcggcggacggcgacgggcccgccggtcgtcc
gtggacgccttcctggacagcgaggctgccgaccccgccgcctcccccgaggcggccccc
gtgccccccaccgggcggcgcaggcggcgtgcggcggaggggcccgcagagacgtcgatc
ccggcacaggcgaccgcggccgagatccccgcggattccagcggtacgggacgccggcgc
ggacgccccggctcgggcgggaacggcgccggaggagtctccgagggatcggtgatgacc
tccgccgagcactccgcccagccggcgcccaccgggctgggagagaccgtgccgccgggc
ggcgtgcccgtgccctcgggcggtcgggcccgccaggacggcgagccgcacgccctgccg
cccgcgctgcccgcggcctccaccgcaccgacgcccgacgccgccggtgccgcacccgcg
ccgaccggtcgccgtcggcgtgccctgggcgccgcgaacgagcgtcccgccgcggcgcag
tccggcccccgcccgatgttcgccctgcctccggccgcggcggaccgggcgccggagcag
cccgtgcccgtgcccctcccggccgacgcgggccgccatgacgcggtgccgcacgaacag
tccgaggaccacaccccgccgcagccacatccggtgtccgcgccgaccggtcgccgccgg
gcccgctccgtcaccgctccggcacagccgccggccggggcggctgcgccctcgccgatc
cccgccgaggggatgccggcccagccggcgcctccgcaggcgccgcccgtgcagcggaca
ccggcgatgcccgccccggtggtgcccgggcaggaaggccgtcagcccctgcccgcaccg
gctctgcccgcccccgcggtgcccgcacagtccgttccgccccagggccttccgccccag
ggcgcgcccggaggtctggtggctcccgggcacccggtccccgccccgtcggcccccggt
gctcagcccgtaccggcggtccagccccagcccgccccgaccggtcaacctctgccgatg
cccccggggcagcccgcgccgtcggcgcagcccgtgccggcggtccaggcccagcccgcg
ccgaccggtcagcccctgccggtggccccggggcagcccatgcccgcgggtcagccggtt
ccggtggccccggagccgccggtgccgacgggccggcccctgcccgctcagccccttctc
cccggagaacccgtcaccgcgccgcggcccgccgcgccggcgcagcccggcccccagccg
gtgcccgcccctgcgccctccgtgggcggtctccccgcggccgccgcgcccgctccgggc
accccggcgtctccgggggcctggccggccaccggtgacacctccggtgccgggatgccc
ctgccggggctcactcccccggccggcaccccgttgcccccggagcgtgccgtcccgccg
cgggccgctcagccgctgcccgccgagacggacctgcccgtcgaccccaactcgacgcag
ggccgggcgatcagtgtgcggacgctggggcagggcgtgcccttcacccgccagggggct
cagccgcaggcgcagccccgcccccagtcgcccacgccccctccgcaccagtcgaacggt
tcgggccgccgtcgcaagctgggcacgccccccgagcctccgggtgagcgtgcggagaca
acggcccggccgcacccgggcaccgcatcgatcccgctgccagcgcagccgcccctgccc
gggcaggggcgtccgtccgtggccaccgagggcgccgggcgctcctacgccataggggcc
ccggacaagaacgccgacgaaggccccgagccgctcgacggtcccggcggcgccgtcgag
atcgccgaccagccccagtcgcggcccctggacgacgagctgcctccggagccgctcgac
aacccccggcgtctgctggtgtggcccgcgccggatgtgacgacccagcaggcgctcagc
gaccgcggctaccggccggtcatcgtcaactcccgtgaggatgtcgacgcgcagatcgcc
gccttcccggccgcgctcttcgtcgacccgctcaccggaccgatcacacggaccgcgctc
cagtcgctgcgccaggcggcggtggccgccgaggtgcccgtgctggtcacggcgggactg
ggtcaggcgacgcgcgaggctgcctacggtgccgacccggccgtcctgctgaaggcgctc
gccccgcgcgactccgagcagcatccgccgcgcgtcctgctcatcgaggagcacgcggag
atcgcgctggccctcacggcgacgctggagcggcgcggaatgcaggtcgcacgcgccgcg
tcggacgcggacgcggtcacgctggccgcgcagatgcggccgaacctcgtggtgatggat
ctgctgcaggtgcaccgccggcaggccggagtcgtcgactggctgcgcgcgaacaatctg
ctcaaccgcaccccactcgtcgtctacaccgcgaccatcggccaggccgatctgccccgg
ctggtgtcgggggagacggtgctgttcctggcggagcgttcgacgaccgccgaggtgcag
gaccggatcgtggatctgctggcgcggatcggcaccaactga
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