Streptomyces nodosus: CP978_17455
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Entry
CP978_17455 CDS
T06839
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snq
Streptomyces nodosus
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snq03032
]
CP978_17455 (gyrB)
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_17455 (gyrB)
Enzymes [BR:
snq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP978_17455 (gyrB)
DNA replication proteins [BR:
snq03032
]
Prokaryotic type
DNA Topoisomerases
CP978_17455 (gyrB)
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP978_17455 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QEV40095
UniProt:
A0A0B5DNG6
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All DBs
Position
3863111..3865198
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AA seq
695 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTDAGVNDDAAIASNGEAAASYDASAITVLEGLDAVRKRP
GMYIGSTGERGLHHLVYEVVDNSVDEALAGYADTIDVTILADGGVRVVDNGRGIPVGIVP
SENKPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSSKVSVEVQTDGHRWTQD
YKMGVPTAPLARHEETSETGTTVSFWADPDIFETTDYSFETLSRRFQEMAFLNKGLTIRL
TDERESAKATSGADEAGADEAPEVKTVTYHYEGGIVDFVKYLNSRKGDVVHPSVISIEAE
DKDKLLSAEVAMQWNNGYSEGVYSFANTIHTHEGGTHEEGFRAALTSLINRYARDKKLLR
EKDDNLTGDDIREGLTAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHLNDWLDRN
PNEAADIIRKSIQAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVE
GDSAGGSAKSGRNPQYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDI
SKLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDDFE
YAYSDRERDALIELGRSNGKRIRDDSVQRFKGLGEMNAEELRVTTMDIDHRVLGQVTLDD
AAQADDLFSVLMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccaccgacgccggcgtgaacgacgacgcggccatcgcctcgaacggcgaggccgcagcc
tcgtacgacgccagcgccatcaccgtcctcgagggtctggacgcggtccgcaagcgaccc
ggcatgtacatcggctcgaccggtgagcgtggactccaccaccttgtgtacgaggtcgtc
gacaactccgtcgacgaggcgctggccggttacgcggacacgatcgacgtcacgatcctc
gccgacggcggtgtgcgtgtcgtcgacaacggccgtggcatcccggtgggcatcgtcccc
tccgagaacaagccggccgtcgaggtcgtgctgaccgtcctgcacgcgggcggcaagttc
ggcggcggcggttacgcggtctccggcggtctgcacggcgtgggcgtgtccgtggtgaac
gccctgtcgagcaaggtgtccgtcgaggtgcagaccgacggtcaccgctggacgcaggac
tacaagatgggcgtcccgacggctccgctggcgcggcacgaggagacgtcagagaccggt
accacggtcagcttctgggccgacccggacatcttcgagaccacggattactccttcgag
acgctgtcacggcgtttccaggagatggcgttcctcaacaagggcctgacgatcaggctc
accgacgagcgcgagtcggcgaaggccacctccggggcggacgaggcgggcgcggacgag
gcccccgaggtcaagaccgtcacgtaccactacgagggcggcatcgtcgacttcgtgaag
tacctcaactcccgcaagggagacgtggtgcacccctcggtgatctccatcgaggccgag
gacaaggacaagctcctgtccgccgaggtcgcgatgcagtggaacaacgggtacagcgag
ggcgtctactccttcgcgaacaccatccacacccacgagggcggtacgcacgaggagggc
ttccgggccgcgctcaccagcctgatcaaccggtacgcgcgcgacaagaagctgctgcgc
gagaaggacgacaacctcacgggtgacgacatccgcgagggtctgaccgcgatcatctcg
gtcaagctgggcgagccccagttcgagggccagaccaagaccaagctgggcaacacggag
gcgaagaccttcgtgcagaaggtcgtgcacgagcacctcaacgactggctggaccgcaac
ccgaacgaggccgcggacatcatccgcaagtccatccaggcggccaccgcgcgcgtggcg
gcccgcaaggcccgcgacctcacccgccgcaagggtctcctggagaccgcgtcgctgccg
ggcaagctctccgactgccagtcgaacgaccccaccaagtgcgagatcttcatcgtcgag
ggtgactccgccggcggctcggccaagtccggccgcaacccgcagtaccaggcgatcctc
ccgatccggggcaagatcctcaacgtcgagaaggcgcggatcgacaagatcctgcagaac
caggagatccaggcgctgatctccgccttcggcaccggtgtgcacgaggacttcgacatc
tccaagctccgctatcacaagatcatcctgatggcggacgccgatgtcgacggccagcac
atcaacaccctgctgctgacgttcctcttccgcttcatgcggccgctggtcgaggccggc
catgtgttcctctcccgcccgccgctctacaagatcaagtggggccgggacgatttcgag
tacgcgtactcggaccgcgagcgcgacgcactgatcgaactgggccgcagcaacggcaag
cggatcagggacgactcggtgcagcgcttcaagggcctcggcgagatgaacgccgaggag
ctgcgcgtgaccaccatggacatcgaccaccgtgttctcggccaggtcaccctcgacgac
gcggcccaggccgacgacctgttctcggtcctcatgggcgaggacgtcgaggcacgccgc
gcgttcatccagcgcaacgccaaggacgtccgcttcctcgacatctga
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