Streptomyces nodosus: CP978_20370
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Entry
CP978_20370 CDS
T06839
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
snq
Streptomyces nodosus
Pathway
snq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP978_20370 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snq03019
]
CP978_20370 (groL)
03110 Chaperones and folding catalysts [BR:
snq03110
]
CP978_20370 (groL)
03029 Mitochondrial biogenesis [BR:
snq03029
]
CP978_20370 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snq04147
]
CP978_20370 (groL)
Enzymes [BR:
snq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CP978_20370 (groL)
Messenger RNA biogenesis [BR:
snq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CP978_20370 (groL)
Chaperones and folding catalysts [BR:
snq03110
]
Heat shock proteins
HSP60 / Chaperonin
CP978_20370 (groL)
Mitochondrial biogenesis [BR:
snq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CP978_20370 (groL)
Exosome [BR:
snq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CP978_20370 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CP978_20370 (groL)
Exosomal proteins of breast cancer cells
CP978_20370 (groL)
Exosomal proteins of colorectal cancer cells
CP978_20370 (groL)
Exosomal proteins of bladder cancer cells
CP978_20370 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QEV40588
UniProt:
A0A0B5DLN4
LinkDB
All DBs
Position
4489944..4491569
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDDLLATARPIEEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILIHQGKIAGIADLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGGTV
ISEEVGLKLDQVGLDVLGGARRVTVTKDDTTIVDGGGKSEDVVGRVAQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HASKVLADGLGKQGDEATGVSIVRRAVVEPLRWIAENAGLEGYVIASKVAELEKGQGYNA
ATGEYGDLLKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAAGHSHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgaacgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggccccaagggccgcaatgtcgtcatcgac
aagaagttcggcgctcccaccatcaccaacgacggtgtcaccatcgcccgtgaggtcgag
gtcgacgacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggtacgaccaccgccaccgtgctcgcccaggcgctcgtccgc
gagggcctgaggaacgtcgccgcgggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgacgacctgctggccaccgcgcgcccgatcgaggagaag
tccgacatcgcggccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctcgacgacccgtacatcctcatc
caccagggcaagatcgccggcatcgcggacctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcc
accctcgtggtgaacaagatccgcggcaccttcaacgccgtcgcggtgaaggcccccggc
ttcggcgaccgccgcaaggcgatgctgcaggacatggcggtcctcaccggtggcacggtc
atctccgaggaggtcggcctcaagctcgaccaggtcggtctggacgtgctgggcggcgcc
cgccgcgtgacggtcaccaaggacgacacgaccatcgtcgacggcggcggcaagtccgag
gacgtcgtcggccgcgtggcgcagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctggtc
cacgcctccaaggtgctggccgacggcctcggcaagcagggcgacgaggccaccggtgtc
tccatcgtccgccgcgcggtcgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctatgtcatcgcctccaaggtcgccgagctggagaagggccagggctacaacgcc
gccaccggcgagtacggcgacctgctcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctcctgctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaagagccggccgcggcgggccacagccacggtcacgcc
cactga
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