Streptomyces nodosus: CP978_24030
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Entry
CP978_24030 CDS
T06839
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
snq
Streptomyces nodosus
Pathway
snq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CP978_24030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snq03019
]
CP978_24030
03009 Ribosome biogenesis [BR:
snq03009
]
CP978_24030
03036 Chromosome and associated proteins [BR:
snq03036
]
CP978_24030
Enzymes [BR:
snq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CP978_24030
Messenger RNA biogenesis [BR:
snq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP978_24030
Ribosome biogenesis [BR:
snq03009
]
Eukaryotic type
90S particles
RNase
CP978_24030
Prokaryotic type
rRNA processing factors
CP978_24030
Chromosome and associated proteins [BR:
snq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CP978_24030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QEV41214
UniProt:
A0A0B5DRL4
LinkDB
All DBs
Position
5323118..5323933
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AA seq
271 aa
AA seq
DB search
MTDAKNGPRRGGGGPADNTASSHTLLEGRLGYQVESALLVRALTHRSYAYENGGLPTNER
LEFLGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVSRGLDLGSFIRLGRG
EEGTGGRDKASILADTLEAVIGAVYLDQGLEAAGELVHRLFDPLIEKSSNLGAGLDWKTS
LQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWR
SIRAAADERDKAAADGGADTASAPASGPATA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccaagaacggtccccgtcgcggcgggggtggtccggcggacaacacagcc
tcgtcccacacgcttctggaagggcggctcggctatcaggtcgagtccgcccttctggtg
cgtgcgctgacgcatcgctcgtacgcgtacgagaacggcggtctgccgacgaacgagcgc
ctggagttcctcggggactccgtgctcggtctcgtggtcaccgacacgctgtaccgcacc
caccccgacctgcccgagggccagctggccaagctgcgggccgcggtggtcaactcgcgt
gcgctcgccgaggtgagccgcgggctcgacctcggctccttcatccggctcggccggggc
gaggagggcacaggcggccgggacaaggcatccattctcgccgacaccctcgaagcggtg
atcggcgccgtctatctcgaccagggtctggaggcggcgggggagctggtgcaccgcctg
ttcgacccgctgatcgagaagtcctcgaatctcggtgccggcctggactggaagaccagc
ctccaggagctgaccgcgaccgaggggctcggtgttcccgagtacctggtcacggagacc
ggcccggaccacgagaagacctttactgctgccgcccgcgtcggaggcgtctcgtacggc
accggcaccggccgcagcaagaaggaggcggagcagcaggccgcggagtcggcctggcgc
tccatccgagcagccgcggacgagcgcgacaaggcggcggccgacgggggcgcggacacc
gcctcggccccggcgagcggcccggccacggcctga
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