Streptomyces nodosus: CP978_24035
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Entry
CP978_24035 CDS
T06839
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
snq
Streptomyces nodosus
Pathway
snq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP978_24035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_24035
Enzymes [BR:
snq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP978_24035
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP978_24035
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP978_24035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
DZR
Zn_ribbon_recom
DUF2688
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QEV41215
UniProt:
A0A0B5DG75
LinkDB
All DBs
Position
5324084..5324959
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVEVVRRGLERWVARRSVAETEVLHPRAVRRHLAGGEDFAHRLKGQRLGTPARRG
KYLWIPVEGTGTAVLAHLGMSGQLLVQPGEAPDEKHLRIRFRFDDALGTELRFVDQRTFG
GLSLHDTAQDGLPDVIAHIARDPLDPLFDDEAFHQALRRKRSTIKRALLDQSLISGVGNI
YADEALWRSRVHYERPTAGFTRPHTAELLGHVRDVMSAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCGTPLRRRPWMNRSSYFCPNCQRPPRAPSRPAAR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtgcggcgcggcctggaacgctgggtcgcccgt
cggagcgtcgccgagaccgaggtgctgcatccgcgcgccgttcgccggcacctcgcgggc
ggcgaggacttcgcgcaccggctgaagggacagcgcctcggcacgcccgcccggcgcggc
aaatacctctggatcccggtggagggcaccgggacggcggtcctggcgcacctcggcatg
agcggccagctcctcgtccagccgggtgaggcccccgacgagaagcatctgcgcatccgg
ttccggttcgacgacgcgctcggcaccgagctgcgcttcgtcgaccagcgcaccttcggc
ggcctctcgctgcacgacaccgcccaggacgggctgcccgacgtcatcgcgcacatcgcc
cgcgaccccctcgacccgctcttcgacgacgaggccttccatcaggcgctgcgccgcaag
cgcagcaccatcaaacgggccctgctcgaccagtccctgatcagcggagtcggcaacatc
tacgcggacgaggcgctgtggcgctcccgcgtccactacgagcgccccacggcgggcttc
acccggccgcacaccgccgaactcctcggccatgtacgggacgtgatgagcgccgcgctg
gcggtgggcggcaccagcttcgacagcctctatgtcaatgtcaacggggagtcgggctac
ttcgaccggtcactggacgcctacggccgtgaggggctgccctgccggcgctgcggcaca
ccgttgcgccgccgcccctggatgaaccggtccagctatttctgcccgaactgccagcgc
ccgccccgcgccccgtcccggcccgccgctcggtga
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