Streptomyces nodosus: CP978_24195
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Entry
CP978_24195 CDS
T06839
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
snq
Streptomyces nodosus
Pathway
snq02020
Two-component system
snq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CP978_24195 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CP978_24195 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snq03021
]
CP978_24195 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
snq02035
]
CP978_24195 (whiG)
Transcription machinery [BR:
snq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP978_24195 (whiG)
Bacterial motility proteins [BR:
snq02035
]
Flagellar system
Flagellar assembly proteins
Stator
CP978_24195 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QEV41244
UniProt:
A0A5P2W5L0
LinkDB
All DBs
Position
5357755..5358597
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AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAALPPAARDGGSVRPPAPSTLDELWRSYKETGDERLREQLILHYSPLVKY
VAGRVSVGLPANVEQADFVSSGVFGLIDAIEKFDLDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARSVERAYATLEARLRRTPSEGEVAAEMGIGVEDLHAVFSQLSLANVVAL
EELLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPDREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLAGFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgctccccccagccgcgcgtgacggc
ggaagcgtgcgcccgcccgctccctcgacgctcgacgagttgtggcggtcgtacaaggag
acgggggacgagcggctgcgggagcagctgatcctgcactactcaccgttggtgaagtat
gtggcgggacgggtgagcgtgggtctgccggccaatgtggaacaggcggacttcgtgtcc
tccggggtcttcgggctgatcgacgcgatcgagaagttcgacctcgaccgggagatcaag
ttcgagacctatgcgatcacgcggatccggggcgcgatgatcgacgagctccgtgcgctg
gactggatcccgcgctcggtgcggcagaaggcgcgcagtgtggagcgggcgtacgcgacc
ctggaggcccggctgcggcgcacgccctccgagggggaggtagcggcggagatggggatc
ggagtggaggacctgcacgcggtcttcagccagctgtcactggccaatgtggtggccctg
gaggagctgctgcacgtcgggggcgagggcggcgaccggctgagtctgatggacaccctg
gaggacaccgccgcggacaaccccgtggaggtcgccgaggaccgggagctgcggaggttc
ctggcacgggccatcaacaccctgcccgaccgggagaagaccgtggtcacgctgtactac
tacgaggggctcacgctcgccgagatcggcaatgtgctgggggtgaccgagagccgggtg
agccagatccacaccaagtcggtgctgcagctgcgggccaagctggccggattcggacgc
tga
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