Streptomyces nodosus: CP978_24805
Help
Entry
CP978_24805 CDS
T06839
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
snq
Streptomyces nodosus
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snq03009
]
CP978_24805 (rimO)
Enzymes [BR:
snq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP978_24805 (rimO)
Ribosome biogenesis [BR:
snq03009
]
Prokaryotic type
ribosomal protein modification factors
CP978_24805 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QEV41345
UniProt:
A0A0B5DQK4
LinkDB
All DBs
Position
5507505..5508977
Genome browser
AA seq
490 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVDDAENADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDSAASVALPGHAPVDLPEGLAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGETEADLAELERFLN
GARLDAIGVFGYSDEEGTEAATYENKLDEDLVAERLARVSRLAEELVSQRAEERVGETVH
VLVESVDGEDGAYGRGAHQAPETDGQVLFTTGEGLAVGRMVEAKVVGTEGVDLVAEPLVG
SLGCPEEAGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcgggccgcttggaggcggacggctggcaactcgtggacgacgccgag
aacgccgatgtcgccgtcgtcaacacctgcggcttcgtcgaagccgccaagaaggactcc
gtggacgccctgttggaggccaacgacctcaaggggcacggaagaacgcaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggaactcgccgaggccctgccggaggcc
gacggcgtgctcggcttcgacgactacgccgacatctcggaccgcctccagaccatcctc
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaaactgctgccgatcagc
ccggcggagcgacaggactcggccgcgtcggtggcgctgcccggccacgctccggtggac
cttccggagggcctcgctccggcctcgggcccccgcgcacccctgcgccgccgcctcgac
ggctctccggtggcctccgtgaagctcgcctcgggctgcgaccggcgttgctccttctgc
gccatcccctccttccgcggctccttcatctcacgccgcccgagcgatgtgctgaacgag
acgcgctggctggccgaacagggtgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctgggcgacatccgcctcctggagtccctgctgccggagctcgcc
gaggtcgacggcatcgagcgggtccgcgtcagctatctccagccggcggagatgcggccc
ggactcatcgacgtgctcacctccacgcccaaggtcgtgccgtacttcgatctgtccttc
cagcactccgcgcccgatgtgctgcgcgcgatgcggcgcttcggcgacaccgaccgcttc
ctggagctgctggacaccatcaggagcaaggcaccccaggcgggagtgcgctccaacttc
atcgtgggcttccccggcgagaccgaggccgacctggccgagctggagcgctttctgaac
ggggcgcgactggacgcgatcggggtcttcggctactccgatgaggagggcaccgaggcc
gcgacctacgagaacaagctcgacgaggacctcgtcgccgaacggctggcccgtgtctcc
cggctggcggaggaactggtgtcccagcgcgccgaggagcgcgtcggcgagaccgtgcac
gtcctggtggagtcggtggacggcgaggacggcgcctacggccgtggggcgcaccaggcc
cccgagaccgacggccaggtgctgttcacgacgggcgagggcctggccgtgggccgtatg
gtcgaggcgaaggtggtcgggacggagggggtcgatctggtggccgagcccctggtgggt
tcgctcgggtgtcctgaggaggcgggcagatga
DBGET
integrated database retrieval system
