Streptomyces nodosus: CP978_27900
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Entry
CP978_27900 CDS
T06839
Name
(GenBank) hypothetical protein
Organism
snq
Streptomyces nodosus
Pathway
snq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP978_27900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T7SS_signal
Motif
Other DBs
NCBI-ProteinID:
QEV41876
UniProt:
A0A5P2WC56
LinkDB
All DBs
Position
complement(6247176..6255494)
Genome browser
AA seq
2772 aa
AA seq
DB search
MARPGDWNALGLDSDPTPGDPDRVDALILSQDDLISLADTIDAGLTDIKNTTDGAFVGET
ADALRKVIDNDLRNYVSTFRQAHQDAQSALRTYVGVMREQQQRADEALNAAAALAEDDEE
GRETHKATAEDARSTLSDAAGTAASALRRAAESIASPVDECEEFWKALGWLALILVIPAM
IVGGPLALFTIGLNVALLIKTAVDFSQGKASVTDLVLSILGVIAPTTKGIRLGTLWKGLK
SIGVAGLKGGKELLLGGPNALGLFGRLTFGLDNTIKVTGVWMKGIHGLEGVRFTAGFKFM
PGVKGFTMGSESIATSFRFVPAAAELTVINLMGAKTFFGLRSLMTGLNGLKGLGSAVGSG
MLNSVRGLNGLRLFLPVAGDELGHGLAFALKVGVIDRGIFGMYRYGAFAGGHFLGAGSKI
SGGVAAGLDIARAGEGLGSLSSLHLSQFVPNSPGSGLGAGVGTLRTLSMSDSIGTVALGD
FHGISSLSSSTPGIGARLVDLPTPGGLSGMDGIHLPQLGPVTSVSTPGLNGLNVPSVPAA
GHGVGSVTVQQIGVPHLNTPGSGVTRIEMPSLGGEALATPAVHTPSVGAVHVPSAGLADM
PSPGQINVPSLGSVAHGPTVTRIDTPGMGARLSDLPAIGGMPRVDVPPVARVEAPAAGAS
STGITVPSVGRVDVPGVSSATGGITAPSPGRVDVPGVGTSVNGITTPSVGHVDVPGGNSS
ANGITTPSVGQVHVPGAGGSGIGIDVPAPSRVEVPSVGQVDLPAIDVHQAESPAVAAPHL
ETAAPHAGAVHAPAVPVAQVDAPSVHAAAIQPPALSTTGLDASAPVTGRLDTPAVPPAVS
VSHITPTPAPTPATTGGLAAPGPGALVADPFKLGRVDLAILAHQTIEVRMMQVGGLNFEH
TFAQIDPSLPGVRVEVHIGNGPHGTNLTVHNPQGVPGVTAVHEVVGGQDVLRVERGLPGG
GTDRWNYALQAPDYPRLGDVQHLPAGASDDIELMPTAPRADTAPVPAVSGAPALVGPSNA
VPAPVPGPALVPAPAVHSRVLDLPGTGGHSIEIRFGETPGRIVDVRQVVPDGGTPVVHPR
VTTDAHGAQIVNVRQPVNAVEVRSLDFAVDPNGLRPLGEERLITLQDGTHSGATVGIDPG
SGAVRHVEGTAVPGGPLGLHGGELVLPTPGGFQLYDPATGLGTRAGTRLTGGGAADGLFV
LPAHDGRTFQITDAGARVHGTVTVTPVQDVLHVHSPRNGQGVVDVHTADGRFSHTALDVQ
DSAYVNLANHHLVDAAGNDIPGATVRPQPHGYRIDDGTHHLVADAQGVHTHDVVTLQGTG
DLVHLDRNTGIPMRLDADGHPRGPITRVGDELHVPGPPHHTTVHDLGGAHTHDLLDLHGG
PFDHRTLHVDLDGTGALGDARVVRQHDGSFRIQEDGHHAVVDADGRYTHEVVPLQGTQDL
VHLPVGGGAPLRVNADGIAQGPVTRVGTEFHVPAGGNRTTVYDGRGVHTDNLLTVQDGLY
RGRDIRLGADGATPRLDGARVVPGADGFRVQGPHGHVTLDAQGGQTGHVVALAGTDHLVH
VPTTGGGAPTLHAADGAPVPHHTLTSRADGTLVVDGPGGIRVHGNDGTLLHTLTPLADGT
AVRLHPGGGLELLDGDLARVADNTVTARPGGGFRVTTANGEVRLHGAGGGLEHTITPPAD
GAHIFHVTDAQGAHQFDMVQLSDSVGTRFVRTDTHALLDGDLTAVPPAGHGTFARDPGGG
YRFDHTTGPRSGEFTVYDVHGKLTEQRINVIDKGVPKPNEHLLVTHPADGSKPTWQRVTL
DGAGQAVAQHGARHWYDFGTVETKGLGNGRVKLLSGSGVEVMERRPLPNGHSVDAYHSTA
GVGTFGRLNQRGVWTEFDANGGVARVGTRHWGESGRSWFDVTTSKGVDTRVRHFQENPDG
GHVLANLDRHPFAQSLATTDWTRFDAEFKEIAHGTRSWGPGRGYTDTMVHPHSGDSVVAH
EKWGRFTLSTHDVRRYHQLEIGADGVPKKDFTSWSAHGKENGRGLTLKNGDFLESRRFAE
QRPPVAFRWLASGDYRAVNFDNVPWLAKDSKLQIHHWTQTSADGKTVTQGVRFVSQNGAI
TDIARDGEILRDTRKLLGGDTVTAGDVKLPDGVGHRDGHLPWSQGEGRPQGHRTFDRTDF
ADLPGVDTRRIRWQDKVTDDLADGDWYTPDAGKQWNVVRVGLDDGTVIDYRPAPGPDART
GHAGAGDWTHYDHHGLVVARQDTWPEPHTGGGLPVQVTTTDMLRGGELRWHDSLGNDGVR
KLNFNRGDMTRWGWDRESYQDFLGDRLIREHHLFKDGTTVDAWAVRGPGGRETWHWNKTG
ADGEIKAFGTGPADRVRHWFDADGNGLMRWEPGARWEDHLAGQGNLKIQEIPAKPAGAGW
FTDAPHRVREYLPDPGGTHNPHVFKEYENGLELGRKVELSDGTFLESEDWHKQWRRFGAD
GVTMIDERTIPGYVWHTDTDTFGRTNVSLIGRETNFTGAFNEYRGYSRMLREVNRWEWGA
TANGVSTTTPFLGRVATALAVEFVQEWVLDFTMNLIVSGIVSAVNGTPFTPKDVARAAFG
ATVGASVKGTFSAGHFAAHRGGPWKTGLSQIDQGNPFTRRPNDDSWAAEFAGNEKVTRWR
SGTYDFGVGLVSGAVSGFVGGAASSAIFGVKDKDGHVHHLSGSDALLAGALGAAGSLAGA
LTTGLGRTMIIQNLGGRWYHRQGFFDIFAVGGLGKLVDKIFSNLFLSGAIVKSAQPGYYQ
GSGEAPGANGGQ
NT seq
8319 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcccggcgactggaatgccctcggcctggacagcgacccgacacccggggat
ccggaccgtgtcgacgcgctgatcctctcccaggacgacctgatcagtctggccgacacc
atcgacgccggtctgacggacatcaagaacaccacggacggcgccttcgtcggcgagacc
gcggacgcgctgcgcaaggtgatcgacaacgatctgcgcaactacgtctccaccttccgg
caggcgcaccaggacgcccagtcggcgctgcgcacctatgtcggcgtgatgcgggagcag
cagcagcgcgcggacgaggcgctgaacgcggcggcggccctggcggaggacgacgaggag
gggcgcgagacgcacaaggcgaccgccgaggacgccaggagcaccctgtcggacgcggcg
ggcaccgcggcgagcgcgctgcgcagggcggcggagagcatcgcctcaccggtggacgag
tgcgaggagttctggaaggcgctgggctggctggcgttgatcctcgtcatcccggcgatg
atcgtgggcggtccgctggcgctcttcaccatcgggctcaatgtggcgctgctgatcaag
acggcggtggacttctcccagggcaaggcgagcgtcaccgatctggtgctgtcgatcctc
ggcgtcatcgcgcccaccaccaagggaatccgcctcggcaccctgtggaagggcctgaag
agcatcggggtcgccggcctcaagggcggcaaggagctcctcctcggcggcccgaacgcg
ctcgggctcttcggccggctgaccttcggcctcgacaacaccatcaaggtcaccggcgtc
tggatgaagggcatccacggcctggagggcgtgcggttcacggccggcttcaagttcatg
ccgggcgtcaagggcttcaccatgggcagcgagtcgatcgccacctccttccggttcgtg
ccggccgccgccgagctgaccgtgatcaacctgatgggtgcgaagacgttcttcggactg
cgctccctgatgaccggactcaacgggctcaagggcctgggcagcgcggtcgggagcggc
atgctgaacagcgtgcgcgggctgaacgggctgcggctcttcctgccggtggccggcgac
gaactcgggcacgggctggccttcgcgctcaaggtcggcgtcatcgaccggggcatcttc
ggcatgtaccggtacggcgccttcgcgggcggccatttcctcggcgccggcagcaagatc
agcggcggggtcgcggccggtctggacatcgcgcgggccggcgagggcctgggttcgctg
tcgtccctccacctcagccagttcgtcccgaactccccgggcagcgggctgggtgcgggg
gtcggcacgctgcggacgctctcgatgagcgactcgatcgggacggtcgcgctcggcgat
ttccacgggatcagctcgctctcctcctccacgcccggcatcggggcccgcctggtggac
ctgccgacgccgggcgggctcagcgggatggacggcatccatctgccgcagctgggcccg
gtgacctcggtgtcgacgcccggtctgaacgggctgaacgtgccgtcggtcccggcggcc
ggccatggcgtcggctcggtgacggtgcagcagatcggggttccgcatctgaacaccccc
ggctccggggtgacccggatcgagatgccgtccctcggcggcgaggcccttgcgaccccc
gcggtccacacgccctccgtcggcgccgtccatgtgccgtcggcgggcctggccgacatg
ccgtcgccgggacagatcaatgtgccgagcctgggctcggtggcccacgggccgacggtc
acccggatcgacacacccggcatgggcgcccggctgagcgacctccccgcgatcggcggg
atgccccgggtggatgtgccgccggtcgcccgggtggaggcgccggccgcgggcgcctcg
tccaccgggatcaccgtgccgtcggtgggccgggtcgacgtaccgggagtctcctccgcc
accggtggcatcacggcgccgtcgccgggccgcgtggacgttcccggggtcggcacctcg
gtcaacggcatcaccactccctcggtcggtcatgtcgacgtgcccgggggcaactcctcg
gccaacggcatcaccaccccctcggtcggtcaggtgcacgtcccgggtgcgggcggctcg
ggcatcgggatcgacgttcccgcgccgtcccgcgtcgaggtcccctcggtgggccaggtg
gacctccccgcgatcgatgtgcaccaggcggagagcccggcggtggccgcgccccatctg
gagacggcggctccccacgccggcgccgtgcacgccccggcggtcccggtggcacaggtg
gacgcgccctcggtgcacgccgccgcgatccagccgcccgccctgtccaccaccggcctg
gacgcctccgccccggtcaccggccggctcgacacccccgccgtcccgccggcggtctcc
gtctcccacatcactccgacgccggcccccaccccggccaccacgggcggcctggccgct
cccggccccggcgccctcgtcgcggacccgttcaagctgggccgggtggacctggccatc
ctcgcgcaccagacgatcgaggtgcggatgatgcaggtgggcgggctcaacttcgagcac
accttcgcccagatcgatccctcgctgcccggcgtccgtgtcgaggtccacatcggcaac
ggcccgcacgggacgaacctgacggtccacaacccgcagggcgtcccgggcgtcaccgcc
gtgcacgaggtggtgggcggtcaggacgtgctgcgcgtggaacgcggtctgccgggcggc
ggcacggaccgctggaactacgcgctccaggccccggactacccgcgcctcggcgatgtg
cagcatctgcccgcgggcgcctccgacgacatcgagctgatgcccaccgccccgcgggcg
gacaccgcgcccgtccccgccgtctccggcgctccggccctggtgggcccgtcgaacgcc
gtgcccgccccggtgcccggccccgccctggtgcccgctcccgccgtccactcccgggtc
ctcgacctgcccggcacgggcgggcacagcatcgagatccgcttcggcgagacgcccggc
cggatcgtcgacgtccggcaggtcgtgcccgacggcggcacgcccgtggtccacccgcgg
gtcaccaccgacgcgcacggcgcccagatcgtgaacgtacgacagcccgtgaacgcggtc
gaggtccgcagcctggacttcgccgtcgacccgaacggtctgcggccgctcggcgaggaa
cgcctgatcacccttcaggacggcacccactccggcgcgacggtcggcatcgacccgggc
agcggcgccgtccggcacgtggagggcaccgcggtgccgggcgggccgctcggcctgcac
ggcggcgagctggtgctgcccaccccgggcggcttccagctctacgacccggcgaccggc
ctcggcacccgggccggcacccggctcacgggcggcggcgccgcggacggcctgttcgtg
ctgccggcccacgacggccggacgttccagatcaccgacgcgggcgcccgggtccacggc
accgtcaccgtcaccccggtgcaggacgtcctccatgtgcacagcccccgcaacgggcag
ggcgtcgtcgacgtccacaccgccgacggccgcttctcccacacggcactggacgtccag
gacagcgcctatgtcaacctggcgaaccatcacctggtcgacgccgccggcaacgacatc
cccggcgccaccgtccgcccgcagccccacggctaccgcatcgacgacggcacccaccac
ctcgtggccgacgcacagggcgtccacacccatgacgtggtcaccctccagggcacgggc
gacctggtccatctggaccggaacaccggcataccgatgcgtctggacgcggacggacac
ccacggggaccgatcacccgggtcggcgacgaactccatgtccccggccccccgcaccac
accaccgtccacgacctcggcggcgcccacacccacgacctgctcgacctgcacggcgga
ccgttcgaccaccgcaccctgcatgtcgacctcgacgggaccggcgctctcggcgacgcc
cgggtcgtccgccagcacgacgggagcttccggatccaggaggacggccaccacgccgtc
gtcgacgccgacggccggtacacccatgaagtcgtcccgctccagggcacccaggacctg
gtccacctcccggtgggcggcggcgccccgctgcgggtgaacgcggacgggatcgcccag
ggcccggtcacccgcgtcggcaccgagttccatgtccccgcgggcggcaaccgcaccacc
gtctacgacggccggggcgtccacaccgacaatctgctcaccgtccaggacggcctctac
cgcggccgggacatccgcctcggcgccgacggtgcgacgccccgtctggacggcgcccgg
gtggtcccgggcgccgacggcttccgcgtccagggcccgcacggccatgtcacgctcgac
gcccagggcggccagaccggccatgtcgtcgcgctggcaggcacggaccacctcgtgcat
gtgccgaccaccggcggcggcgcgccgaccctgcacgccgccgacggcgcgcccgtcccg
caccacaccctcacctcccgcgcggacggcaccctcgtcgtcgacggaccgggcggcatc
cgggtgcacggcaacgacggcaccctgctgcacaccctgacccccctcgccgacgggacg
gccgtacggctgcacccgggcggcggcctggaactgctcgacggcgacctcgccagggtc
gccgacaacacggtcaccgcccgtcccggcggcggcttccgggtcaccaccgcgaacggc
gaggtacggctgcacggcgcgggcggcggcctggagcacaccatcaccccgcccgccgac
ggcgcccatatcttccatgtcaccgacgcccagggcgcgcaccagttcgacatggtgcag
ctctccgacagcgtgggcacccgcttcgtgcgcacggacacccatgcgctgctcgacggc
gacctgaccgccgtccccccggctgggcacgggacgttcgcccgggaccccggcggcggt
taccgcttcgaccacaccacgggcccccgcagcggcgagttcacggtgtacgacgtgcac
ggcaagctcaccgagcagcggatcaacgtcatcgacaagggcgtccccaagccgaacgag
catctgctggtcacccacccggcggacgggagcaagccgacctggcagcgggtcaccctg
gacggggccggccaggcggtcgcgcagcacggcgcccgccactggtacgacttcggcacc
gtcgagaccaagggcctcggcaacgggcgggtcaagctgctcagcggctccggtgtggag
gtcatggaacggcgcccgctgccgaacgggcactcggtggacgcgtaccactccacggcg
ggcgtcggcaccttcgggcggctcaaccagcgcggtgtgtggacggagttcgacgccaac
ggcggcgtggcccgggtcggcacccggcactggggcgagagcggccggagctggttcgat
gtgacgacgtccaagggcgtcgacacccgggtacgccacttccaggagaacccggacggc
ggccatgtcctggcgaacctggaccggcatccgttcgcccagagcctcgcgacgacggac
tggacccgtttcgacgccgagttcaaggagatcgcgcacggcacccggtcctgggggccc
ggccgcggctacaccgacaccatggtccatccgcactcgggcgactcggtcgtggcgcac
gagaagtggggccgcttcaccctcagcacgcacgatgtgcgccgctaccaccagctggag
atcggcgcggacggcgtaccgaagaaggacttcacctcctggtcggcgcacggcaaggag
aacggacgcggactgacgctcaagaacggcgacttcctggagagccggcggttcgccgag
cagcgccccccggtggccttccgctggctggcgagcggcgactaccgcgccgtgaacttc
gacaacgtgccctggctcgcgaaggacagcaagctccagatacatcactggacccagacc
tcggccgacgggaagaccgtcacccagggcgtgcggttcgtcagccagaacggcgcgatc
accgacatcgcccgcgacggcgagatcctccgcgacacccgcaagctgctcggcggcgac
accgtcaccgccggcgatgtgaagctgccggacggagtgggccaccgggacggccatctg
ccctggtcccagggcgagggcaggccgcagggccatcgcaccttcgaccgcaccgacttc
gccgacctccccggcgtggacacccggcgcatccgctggcaggacaaggtcaccgacgac
ctcgccgacggcgactggtacaccccggacgcgggcaagcagtggaacgtggtccgggtc
ggcctggacgacggcacagtgatcgactaccgcccggcgcccggccccgatgcccgcacc
ggacacgccggtgccggcgactggacccactacgaccaccacggcctggtcgtcgcccgc
caggacacctggcccgagccgcacaccggtggcggcctgccggtccaggtcaccaccacg
gacatgctgcgcggcggggaactgcgctggcacgacagcctcggcaacgacggcgtgcgc
aaactcaacttcaaccgcggcgacatgacccgctggggctgggaccgggagtcgtaccag
gacttcctgggcgaccggctgatccgcgaacaccatctgttcaaggacggcaccaccgtg
gatgcctgggcggtgcgcgggccgggcggccgggagacctggcactggaacaagaccggc
gcggacggggagatcaaggccttcggcaccgggcccgccgaccgggtgcggcactggttc
gacgcggacggcaacgggctgatgcggtgggagcccggcgcccgctgggaggaccacctg
gccggccagggcaacctcaagatccaggagatccccgccaagcccgccggcgccggatgg
ttcaccgacgccccgcaccgggtccgcgagtatctgcccgacccgggcggcacccacaac
ccgcatgtcttcaaggagtacgagaacggcctcgaactgggccgcaaggtcgagctgtcg
gacggcaccttcctggagagcgaggactggcacaagcagtggcgccggttcggcgccgac
ggcgtcacgatgatcgacgagcggaccatcccggggtacgtctggcacaccgacaccgac
accttcggccggaccaatgtctcgctgatcggccgggagaccaacttcaccggcgcgttc
aacgagtaccggggctacagccggatgctgcgcgaggtcaaccgctgggagtggggcgcc
accgcgaacggcgtctccaccaccaccccgttcctcggccgggtcgcgaccgcgctcgcc
gtggagttcgtgcaggagtgggtgctcgacttcacgatgaacctcatcgtctccggcatc
gtcagcgccgtcaacggaaccccgttcacgcccaaggacgtcgcccgcgccgccttcggc
gcgaccgtcggcgccagtgtgaaggggaccttcagcgccgggcacttcgccgcccaccgc
ggtggcccctggaagaccgggctcagccagatcgaccagggcaacccgttcacccgccgc
cccaacgacgactcctgggcggccgagttcgccggcaacgagaaggtgacccgctggcgg
tcgggcacctacgacttcggggtcggcctggtcagcggcgccgtctccggattcgtcggc
ggggccgcgtcctccgcgatcttcggagtgaaggacaaggacggccatgtccaccatctc
tccggctcggacgccctgctggcgggcgcgcttggcgccgcgggcagcctggccggcgcc
ctcaccaccggcctgggccgtacgatgatcatccagaacctcggcggccgctggtaccac
cgccagggcttcttcgacatcttcgccgtcggcggcctgggcaagctggtggacaagatc
ttctccaacctgtttctgtcgggggcgatcgtcaagtccgcccagccgggctactaccag
ggctcgggcgaggcaccgggcgcgaacggggggcagtga
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integrated database retrieval system
