Streptomyces nodosus: CP978_31255
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Entry
CP978_31255 CDS
T06839
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
snq
Streptomyces nodosus
Pathway
snq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP978_31255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_31255
Enzymes [BR:
snq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CP978_31255
DNA repair and recombination proteins [BR:
snq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP978_31255
Prokaryotic type
CP978_31255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SPMIP5
Motif
Other DBs
NCBI-ProteinID:
QEV42420
UniProt:
A0A0B5DJQ8
LinkDB
All DBs
Position
complement(7035118..7035795)
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AA seq
225 aa
AA seq
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MAPRPLHEIVEPGWAKALEPVAGRVAEMGDFLRAEITAGRTYLPAGPNVLRAFQQPFDEV
RVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLINIFRELNTDLGLPQPSNGDLTPWTQ
QGVLLLNRALTTAPRRPAAHRGKGWEEVTEQAIRALAARGKPLVSILWGRDARNLRPLLG
ELPSVESAHPSPMSADRGFFGSRPFSRANDLLIRQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccacgaccgttgcatgagatcgtcgaacccggctgggcgaaggccctcgagccc
gtggccggaagagtcgccgagatgggggacttcctgcgtgcggagatcaccgccgggcgc
acctacctcccggcgggaccgaacgtcctacgggccttccagcagcccttcgacgaggtc
cgcgtcctgatcgtcggccaggacccctatcccacaccggggcacgcggtggggctgtcg
ttctcggtcgccccggaggtacgaccgctgccgggcagtctgatcaacatcttccgggag
ctgaacaccgatctgggcctgccccagccgtccaacggcgacctcactccctggacccag
cagggcgtgctgttgctcaacagagcgctcaccacggccccgcgccgtcctgcggcacac
cgcggcaagggctgggaggaggtcaccgagcaggccataagggccctggccgcgcgcgga
aagccgctggtgtccatcctgtgggggcgtgacgcccgcaatctgcggccgttgctcggc
gagttgccgtcggtcgagtcggcgcacccgtccccgatgtccgcggaccggggcttcttc
ggctcacgtccgttcagccgggccaacgacctgctgatcagacagggcgcacagccggtg
gactggcgtctgccgtga
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