Streptomyces noursei ATCC 11455: SNOUR_10800
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Entry
SNOUR_10800 CDS
T04806
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
snr
Streptomyces noursei ATCC 11455
Pathway
snr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SNOUR_10800 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snr03000
]
SNOUR_10800 (alkA)
03400 DNA repair and recombination proteins [BR:
snr03400
]
SNOUR_10800 (alkA)
Enzymes [BR:
snr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SNOUR_10800 (alkA)
Transcription factors [BR:
snr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SNOUR_10800 (alkA)
DNA repair and recombination proteins [BR:
snr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SNOUR_10800 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ANZ15474
LinkDB
All DBs
Position
complement(2430875..2432347)
Genome browser
AA seq
490 aa
AA seq
DB search
MHTDTERCLRAVQSKDARFDGWFYIAVVTTGIYCRPSCPVVPPKPQNMRFYPSAAAAQQA
GFRACKRCRPDASPGSPQWDERADLVARAMRLIADGIVDRDGVPGLAARLGYSPRQIERQ
LRAELGAGPLALARAQRAQTARLLIETTALPMAEIAFAAGFASIRSFNETVREVFALSPT
ELRGRARPGPRPTTPGTLTLRLPFRQPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLDLP
YGHGIVALAPRPDHIDCRLSLTDLRDLAGAIARCRRMLDLDADPEAVDGLLRTDPQLAPL
VDKAPGRRVPRTTDADEFAVRAVLGQQVSTAAARTHAGRLVRAHGEPIDDPGGGLTHLFP
TPTALAALDPETLAMPRTRRATLTGVVAALASGTLQLDVGSDRDEARARLAALPGIGPWT
VECIAMRALGDPDAFTPTDLGLRRAAAGLGLPATPAALTRHSARWRPWRAYAVQYLWATD
DHPINHLPTN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgtctgcgcgccgtgcaatccaaggacgcccgcttcgac
ggatggttctacatcgccgtcgtcaccaccggcatctactgccgacccagctgcccggta
gtgccccccaagcctcagaacatgcgcttctaccccagcgccgcagccgcccagcaggcc
ggattccgggcctgcaaacgctgccgcccggacgccagccccggctccccgcagtgggac
gaacgcgccgacctcgtcgcccgcgccatgcggctgatcgccgacggcatcgtcgaccgc
gacggcgtccccggcctcgccgcccgcctcggctacagcccccgccagatcgaacgccaa
ctgcgcgccgagctcggcgccggccccctcgccctggcccgcgcccagcgcgcccagacc
gcccggctcctgatcgagaccaccgcgctccccatggccgagatcgccttcgccgccggc
ttcgccagcatccgctccttcaacgagaccgtccgcgaggtcttcgccctctccccgacc
gaactccgcggacgcgcccgccccggcccccgccccaccacccccggcaccctcaccctg
cggctccccttccggcagccgctcaaccccgacaacctcttcggccacctcgccgccacc
gccgtccccggcgtcgaggaatggcgcgacggcgcctaccgccgcaccctcgacctcccc
tacggccacggcatcgtcgccctcgcaccccgccccgaccacatcgactgccggctctcc
ctcaccgacctccgcgacctggccggcgccatcgcccgttgccgccggatgctcgacctc
gacgccgacccggaggccgtcgacggccttctgcgcaccgacccgcagctcgccccgctc
gtcgacaaggcccccggccgacgggtgccgcgcaccaccgacgccgacgagttcgcggtc
cgcgccgtcctaggccagcaggtctccaccgccgccgcccgcacccacgccggccgcctg
gtccgcgcccacggcgaaccgatcgacgaccccggcggcggcctcacccacctcttcccc
acccccaccgcgctcgccgcactcgacccggaaaccctcgccatgccccgcacccgccgc
gccaccctcaccggcgtcgtcgcggcgctcgcctccggcaccctccaactcgacgtcggc
agcgaccgggacgaggcccgcgcccgcctcgccgcgctccccggcatcggcccctggacc
gtcgaatgcatcgccatgcgcgccctcggcgaccccgacgccttcacccccaccgacctc
gggctgcgccgcgccgccgccggcctcggcctgcccgccacccccgcggccctgacccgg
cactccgcccgctggcgcccctggcgcgcctacgccgtccagtacctctgggcgaccgac
gaccaccccatcaaccacctcccgacgaattga
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