Streptomyces noursei ATCC 11455: SNOUR_12510
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Entry
SNOUR_12510 CDS
T04806
Symbol
hrdB
Name
(GenBank) sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
snr
Streptomyces noursei ATCC 11455
Pathway
snr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SNOUR_12510 (hrdB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snr03021
]
SNOUR_12510 (hrdB)
Transcription machinery [BR:
snr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SNOUR_12510 (hrdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
Paramyxo_P_V_N
Motif
Other DBs
NCBI-ProteinID:
ANZ15813
LinkDB
All DBs
Position
complement(2841822..2843372)
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AA seq
516 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSVAAKSPAKRTATKTVAAKTATVKKTTTASAAAAMADP
ALGESESAPAKKAAAKKTAAKKTVAKKTTAKKATAKKTGSKKDVDDLLEDELTEETPAPG
KGEPTDAETAENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVE
LAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTG
RGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHM
VEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGD
SEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEI
GKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggcagatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgttctgcgcagcctcaaccag
atcctcgacgaggagggtgtgacgctgatggtcagtgccgcagaggcgcccaagcgcacc
cgcaagagcgtcgcagcgaagagtccggcgaagcgcaccgccaccaagaccgtcgcggcc
aagaccgccacggtgaagaagaccaccaccgcctcggccgccgccgcgatggcggatccg
gccctcggtgagtccgagtccgcgcctgcgaagaaggccgcggcgaagaagacggccgcc
aagaagacggtcgcgaagaagaccacggccaagaaggccaccgcgaagaagaccgggtcc
aagaaggacgtcgacgatctgctcgaggacgagctgaccgaggagaccccggcgcccggc
aagggcgagcccaccgacgccgagaccgccgagaacgccggtttcgtgctgtcggacgag
gacgaggacgacgcgcccgcccagcaggtcgccgcggccggcgccaccgccgacccggtc
aaggactacctcaagcagatcggcaaggtcccgctcctcaacgccgagcaggaggtcgag
ctcgccaagcgcatcgaggcgggtctgttcgcggaggacaagctcgccaacagcgacaag
ctcgcgcccaagctgaagcgcgagctggagatcatcgccgaggacggccgccgggcgaag
aaccacctcctggaggccaacctccgactggtcgtctccctggccaagcggtacaccggc
cgcggcatgctcttcctggacctgatccaggagggcaacctcggtctgatccgtgcggtc
gagaagttcgactacaccaagggctacaagttctcgacctacgcgacgtggtggatccgc
caggccatcacccgcgccatggccgaccaggctcgcacgatccgtatccccgtccacatg
gtcgaggtcatcaacaagctggcccgcgtccagcgccagatgctccaggacctgggccgc
gagcccaccccggaggagctggccaaggaactcgacatgacccccgagaaggtcatcgag
gtccagaagtacgggcgcgagccgatctccctgcataccccgctgggcgaggacggcgac
agcgagttcggtgacctcatcgaggactccgaggcggtcgtcccggccgacgcggtcagc
ttcacgctcctccaggagcagctgcactcggtgctggacaccctctccgagcgcgaggcc
ggcgtggtgtccatgcggttcggcctcacggacggccagcccaagaccctcgacgagatc
ggcaaggtctacggcgtcacccgcgagcggatccgccagatcgagtccaagaccatgtcg
aagctgcgccacccgtcgcgctcccaggtgctgcgggactacctcgactag
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integrated database retrieval system