KEGG   Streptomyces noursei ATCC 11455: SNOUR_12510
Entry
SNOUR_12510       CDS       T04806                                 
Symbol
hrdB
Name
(GenBank) sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
snr  Streptomyces noursei ATCC 11455
Pathway
snr02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:snr00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SNOUR_12510 (hrdB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snr03021]
    SNOUR_12510 (hrdB)
Transcription machinery [BR:snr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SNOUR_12510 (hrdB)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 Paramyxo_P_V_N
Other DBs
NCBI-ProteinID: ANZ15813
LinkDB
Position
complement(2841822..2843372)
AA seq 516 aa
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSVAAKSPAKRTATKTVAAKTATVKKTTTASAAAAMADP
ALGESESAPAKKAAAKKTAAKKTVAKKTTAKKATAKKTGSKKDVDDLLEDELTEETPAPG
KGEPTDAETAENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVE
LAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTG
RGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHM
VEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGD
SEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEI
GKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1551 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggcagatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgttctgcgcagcctcaaccag
atcctcgacgaggagggtgtgacgctgatggtcagtgccgcagaggcgcccaagcgcacc
cgcaagagcgtcgcagcgaagagtccggcgaagcgcaccgccaccaagaccgtcgcggcc
aagaccgccacggtgaagaagaccaccaccgcctcggccgccgccgcgatggcggatccg
gccctcggtgagtccgagtccgcgcctgcgaagaaggccgcggcgaagaagacggccgcc
aagaagacggtcgcgaagaagaccacggccaagaaggccaccgcgaagaagaccgggtcc
aagaaggacgtcgacgatctgctcgaggacgagctgaccgaggagaccccggcgcccggc
aagggcgagcccaccgacgccgagaccgccgagaacgccggtttcgtgctgtcggacgag
gacgaggacgacgcgcccgcccagcaggtcgccgcggccggcgccaccgccgacccggtc
aaggactacctcaagcagatcggcaaggtcccgctcctcaacgccgagcaggaggtcgag
ctcgccaagcgcatcgaggcgggtctgttcgcggaggacaagctcgccaacagcgacaag
ctcgcgcccaagctgaagcgcgagctggagatcatcgccgaggacggccgccgggcgaag
aaccacctcctggaggccaacctccgactggtcgtctccctggccaagcggtacaccggc
cgcggcatgctcttcctggacctgatccaggagggcaacctcggtctgatccgtgcggtc
gagaagttcgactacaccaagggctacaagttctcgacctacgcgacgtggtggatccgc
caggccatcacccgcgccatggccgaccaggctcgcacgatccgtatccccgtccacatg
gtcgaggtcatcaacaagctggcccgcgtccagcgccagatgctccaggacctgggccgc
gagcccaccccggaggagctggccaaggaactcgacatgacccccgagaaggtcatcgag
gtccagaagtacgggcgcgagccgatctccctgcataccccgctgggcgaggacggcgac
agcgagttcggtgacctcatcgaggactccgaggcggtcgtcccggccgacgcggtcagc
ttcacgctcctccaggagcagctgcactcggtgctggacaccctctccgagcgcgaggcc
ggcgtggtgtccatgcggttcggcctcacggacggccagcccaagaccctcgacgagatc
ggcaaggtctacggcgtcacccgcgagcggatccgccagatcgagtccaagaccatgtcg
aagctgcgccacccgtcgcgctcccaggtgctgcgggactacctcgactag

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