Streptomyces noursei ATCC 11455: SNOUR_14825
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Entry
SNOUR_14825 CDS
T04806
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
snr
Streptomyces noursei ATCC 11455
Pathway
snr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOUR_14825 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snr03021
]
SNOUR_14825 (rho)
03019 Messenger RNA biogenesis [BR:
snr03019
]
SNOUR_14825 (rho)
Transcription machinery [BR:
snr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SNOUR_14825 (rho)
Messenger RNA biogenesis [BR:
snr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SNOUR_14825 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
VAD1-2
AAA
NACHT
AAA_22
ResIII
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ANZ16267
LinkDB
All DBs
Position
complement(3409481..3411493)
Genome browser
AA seq
670 aa
AA seq
DB search
MSDTTDLMGARTDGSATTPATDAPAAPATTRRRRSGTGLEGMVLAELQQIASGLGIKGTA
RMRKSQLIEVIKEKQAAGSGAAAKADAPADTETKPKRRTTSKARTGEDGAEPAAKAAKST
KAADKSGTQQQIDIPGQPVSDEAPAGERRRRRATAPAGSPDADVRTEAKVEAATAVKTEV
RTDTAVAPQEAGEGRSAKGAERQERGDRQDRGQKGERGRRDRDRDRDRDRDRRKTEAGDS
GQGGNRQRDRRDGDDEDFEGGRRGRRGRYRDRRGRRGREDFAGEPQVAEDDVLIPVAGIL
DILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPKDGERREKFNALVR
LDSVNSMAPEQGRQRPEFGKLTPLYPQERLRLEGESGGLTTRIIDLVTPIGKGQRGLIVA
PPKTGKTMIMQAIANSITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPAED
HTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPK
RFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNLELKLDRKLSDKRIFPAV
DVDASSTRKEEILMGSDELAIVWKLRRVLHALDQQQAIELLLDKMKQTKSNAEFLLQIQK
TTPTTGNGND
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcgcgcaccgatggcagtgccaccacgcccgcc
acggacgctcccgccgcgcctgccaccacgcgacgccgccgttccggcaccggccttgag
ggcatggtcctggcagagctccagcagattgcctccggcctcggtatcaagggcaccgcg
cggatgcgcaagagccagctgatcgaggtcatcaaggagaagcaggctgccggctccggg
gccgctgccaaggccgacgcgcccgcagacaccgagaccaagcccaagcgccgcacgacc
tccaaggcccgcacgggcgaggacggcgccgagccggcggccaaggccgccaagtcgacc
aaggccgcggacaagtccgggacgcagcagcagatcgacatcccgggccagccggtcagc
gacgaggcgccggccggcgagcgtcgccgtcgccgggccaccgcccccgcgggcagcccg
gacgccgacgtccgcaccgaggccaaggtcgaggccgccaccgcggtcaagaccgaggtc
cgtaccgacaccgcggtcgccccgcaggaggccggcgagggccggtccgccaagggcgcc
gagcgtcaggagcgcggggaccgtcaggaccgcggccagaagggcgagcgcggtcggcgc
gatcgtgaccgcgaccgcgatcgtgaccgcgaccgtcgcaagaccgaagcgggcgacagc
ggccagggcggcaaccgccagcgggaccgccgggacggcgacgacgaggacttcgagggc
ggccggcgcggtcggcgcggccgttaccgcgaccgccgcgggcgccgtggccgcgaggac
ttcgccggtgagccgcaggtggccgaggacgacgtgctgatcccggtcgcgggcatcctc
gacatcctcgacaactacgcgttcatccggacctccggctacctgcccggcccgaacgac
gtgtacgtctcgctcgcccaggtccgcaagaacggcctgcgcaagggcgaccacgtcacc
ggcgcggtccgccagcccaaggacggcgagcggcgcgagaagttcaacgccctggtgcga
ctggacagcgtcaacagcatggcacccgaacagggccgccagcggccggagttcgggaag
ctgacgcccctttacccgcaggagcgactgcgcctggagggcgagtcgggcggcctgacg
acccggatcatcgacctggtcacgccgatcggcaagggccagcgtggtctgatcgtggcc
ccgccgaagaccggcaagaccatgatcatgcaggcgatcgccaactcgatcacccgcaac
aaccccgagtgccacctgatggtcgtcctcgtcgacgagcgtccggaagaggtcaccgac
atgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgaccgcccggccgaggac
cacaccaccgtcgccgagctcgccatcgagcgcgccaagcgtctggtcgagctcggtcac
gacgtggtcgtgctgctggactccatcacccgtctgggccgcgcgtacaacctcgcggcg
cccgcctccggccgcatcctgtccggtggtgtcgactcgaccgcgctctacccgccgaag
cgcttcttcggtgccgcgcgcaacatcgaggacggcggttcgctgaccatcctggccacc
gcgctggtcgagaccggctctcggatggacgaggtgatcttcgaggagttcaagggcacc
ggcaacctggagctcaagctcgaccgcaagctctccgacaagcgcatcttccccgcggtg
gacgtggacgcgtccagcacccgtaaggaagagatcctgatgggcagcgacgagctggcc
atcgtctggaagctgcgccgggtgctgcacgcgctggaccagcagcaggccatcgagctt
ctgctggacaagatgaagcagacgaagtccaacgcggagttcctgctccagatccagaag
acgacgccgaccacgggcaacggcaacgactga
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integrated database retrieval system
