Streptomyces noursei ATCC 11455: SNOUR_22310
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Entry
SNOUR_22310 CDS
T04806
Symbol
hrpA
Name
(GenBank) RNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
snr
Streptomyces noursei ATCC 11455
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snr03019
]
SNOUR_22310 (hrpA)
Enzymes [BR:
snr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SNOUR_22310 (hrpA)
Messenger RNA biogenesis [BR:
snr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SNOUR_22310 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
HA2_N
AAA_22
nSTAND3
AAA_16
T2SSE
NACHT
ResIII
SLFN-g3_helicase
AAA_25
NTPase_1
PhoH
SRP54
Motif
Other DBs
NCBI-ProteinID:
ANZ17742
LinkDB
All DBs
Position
complement(5049371..5053390)
Genome browser
AA seq
1339 aa
AA seq
DB search
MSSQPASALSDGAAPTLPSLLKRLPELMLRDQQRLGRRIDGARRIRKPEARAAVLAEIAA
GLDEAELRVAQRRAAMPAVSYPEELPVSQKKDEILAAVRDHQVVIVAGETGSGKTTQIPK
ICLELGRGVQGLIGHTQPRRIAARTVAERVAEELKTPLGEAVGWKVRFTDQVGDDTLVKL
MTDGILLAEIQTDRELRQYDTIIIDEAHERSLNIDFILGYLAQLLPRRPDLKVVITSATI
DPERFSRHFGDAPIVEVSGRTYPVEVRYRPLLEEGGQDPDRDQITAICDAVDELQAEGPG
DVLVFLSGEREIRDTADALNKKNLPATEVLPLYARLSHAEQHRVFQRHTGRRIVLATNVA
ETSLTVPGIKYVIDPGMARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRTSDGICIRL
YSEDDFLTRPEFTDAEILRTNLASVILQMTAAGLGDIEKFPFIDAPDRRNIKDGVDLLRE
LGALDTAQQDTRKRLTPLGRKLSQLPVDPRLARMVLEAERNGCVREVMVIAAALSIQDPR
ERPSDKQQQADQQHARFKDEASDFLAFLNLWGYVREQQKALSSSAFRRMCRSEFLNYLRI
REWQDIYSQLRTVAKSMGVHLNETDAAPEHIHTSLLSGLLSHIGLKDTDAKNEYLGARSA
KFAVFPGSALFKKPPRWVMSAELVETSRLWARVNARIEPEWIEPLAQHLVKRNYSEPHWE
QKMAAVMAYERVTLYGVPIVAQRKVNYGRIDPEVSRDLFIRNALVEGDWRTHHQFFHDNR
KLLGEVEELEHRARRRDILVDDETLFDFYDQRIPADVVSGAHFDSWWKKQHREDPDLLNF
EHSMLINESAEAVTKDDYPDSWRQGKLKFKVTYQFEPGADADGVTVHIPLQVLNQVASEG
FDWQIPGLREQLVTELIRSLPKPIRRNYVPAPNFAARFLDTTVPLQGALTTSLAAGLQRM
VGVPVEAADFDLTKVPDHLKITFRVYDAASNSGSAAGRRKLAEAKDLEALRLQLKPKTQA
AISRAFEQAAERPGKDRRGGRRETPLAGPEQRTGLTSWTVGTLPRTFETRRTGQPVKAYP
ALVDEGSSVAVRLFDTEAEQLSAMWAGTRRLILLNIPTNPAKFAQDKLSNQQKLALSRNP
HGSIAALFEDCVTAAADRLIAARGGPVWDEESFRKLFEAVRADLVEATLKTIQQVQEVLA
AWQACERRLKATAFPSLLPSLADVKEQLAALIKPGFVTAHGAKRLPDLMRYLVAVDRRLT
QLPTNAERDRSRMAKVKEMQDEYAWLLEQFPQGRPVPAAAREIRWMIEELRVSYFAHALG
TAYPVSDKRIMKAVDAAAP
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcagcctgcctccgccctgtccgacggtgccgcccccacgctgccctccctg
ctgaagcgacttcccgagctgatgctgcgcgaccagcagcggctggggcgccggatcgac
ggcgcgcgccggatccgcaagcccgaagcccgggcggcggtgctcgccgagatcgccgcg
ggcctcgacgaggcggagctgcgcgtggcgcagcggcgcgccgcgatgccggcggtgagc
tatccggaggaactcccggtcagccagaagaaggacgagatcctggcggccgtccgcgac
caccaggtggtgatcgtcgcgggcgagaccggctccggcaagaccacccagatccccaag
atctgtctggagctggggcgcggcgtccaggggctgatcgggcacacccagccgcgtcgg
atcgcggcccgtacggtcgccgagcgggtggccgaggagctgaagacgccgctgggcgag
gcggtcggctggaaggtccgcttcaccgaccaggtcggcgacgacaccctcgtcaagctg
atgacggacggcatcctgctcgccgagatccagacggaccgggagctgcgccagtacgac
acgatcatcatcgacgaggcgcacgagcgcagcctcaacatcgacttcatcctgggctac
ctggcgcagctgctgcccaggcgcccggatctgaaggtcgtcatcacctccgcgacgatc
gaccccgagcggttctcccggcacttcggggacgcgccgatcgtcgaggtctccgggcgg
acgtacccggtcgaggtgcgctaccggccgctgctggaggagggcggccaggaccccgat
cgcgaccagatcaccgcgatctgcgacgcggtggacgagctccaggccgagggccccggc
gacgtcctggtcttcctctccggtgaacgggagatccgcgacaccgcggacgcactgaac
aagaagaacctccccgccacggaggtgctgccgctgtacgcccggctgtcgcacgccgag
cagcaccgggtcttccagcgccatacgggccggcggatcgtgctggccacgaacgtggcc
gaaacctcgctgaccgtccccggcatcaagtacgtgatcgacccgggcatggcccggatc
tcccggtacagcttccgcaccaaggtgcagcggctgcccatcgagccggtgtcgcaggcc
agtgccaaccagcgcaagggccgctgcggccggaccagcgacggcatctgcatccggctg
tactcggaggacgacttcctcacccgcccggagttcaccgacgcggagatcctccggacc
aacctcgcctccgtcatcctccagatgaccgcggccggcctcggcgacatcgagaagttc
ccgttcatcgacgcgccggaccgccgcaacatcaaggacggcgtcgatctgctgcgcgag
ctgggcgcgctggacaccgcgcagcaggacacccgcaagcggctgaccccgctgggccgc
aagctctcccagctgccggtggacccgcggctggcccggatggtgctggaggcggagcgc
aacggctgtgtccgcgaggtcatggtgatcgcggcggcgctgtccatccaggacccgcgg
gagcggccgtcggacaagcagcagcaggccgaccagcagcacgcccgcttcaaggacgag
gcgtcggacttcctggcgttcctcaacctctggggctacgtccgcgagcagcagaaggcg
ctgtcctcgtccgccttccgccggatgtgccgatcggagttcctgaactacctgcggata
cgcgaatggcaggacatctattcgcagctgcggacggtcgccaagagcatgggcgtccac
ctgaacgagacggacgcggcgccggagcacatccacacgtcattgctctccggtttgctt
tcgcacatcggactcaaggacacggacgccaagaacgagtacctgggcgcccgcagcgcg
aagttcgcggtgttccccggctccgcgctcttcaagaagccgccgcgctgggtgatgtcc
gcggagctggtcgagacctcccggctgtgggcgcgggtgaacgcccggatcgaaccggag
tggatcgagccgctggcccagcatctggtgaagcggaactacagcgagccgcactgggag
cagaagatggccgcggtgatggcgtacgagcgggtgacgctctacggcgtcccgatcgtg
gcccagcgcaaggtcaactacgggcggatcgaccccgaggtctcccgtgacctgttcatc
cggaacgccctggtcgagggcgactggcgcacccaccaccagttcttccatgacaaccgc
aaactcctcggcgaggtcgaggagttggagcaccgcgcccggcgccgcgacatcctcgtc
gacgacgagacgctcttcgacttctacgaccagcggatcccggcggacgtggtctccgga
gcgcacttcgactcctggtggaagaagcagcaccgggaagacccggacctgctgaacttc
gagcactcgatgctcatcaacgagtccgccgaggccgtcaccaaggacgactacccggac
tcctggcggcaggggaagctgaagttcaaggtcacctaccagttcgagccgggcgcggac
gcggacggcgtgaccgtccacatcccgctccaggtcctcaaccaggtcgcctccgagggc
ttcgactggcagatcccgggcctgcgcgagcagttggtgaccgagctgatccgttccctg
cccaagccgatccgccgcaactacgtcccggcgccgaacttcgccgcccgtttcctggac
accaccgtccccctccagggcgccctgacgacgtcgctggccgccggcctgcagcggatg
gtgggggtaccggtggaggccgcggacttcgacctcaccaaggtcccggaccacctgaag
atcaccttccgggtgtacgacgccgcctccaacagcggctccgccgcgggccgccgcaag
ctcgccgaggccaaggacctggaggcgctgcggctccagctgaagccgaagacccaggcc
gccatctcccgggccttcgagcaggccgccgagcggcccggcaaggaccgcaggggcggc
cggcgggagaccccgctggccggtccggagcagcgcaccggcctgacgtcctggacggtc
ggcacgctgccgcgcaccttcgagacccgccgcaccggccagccggtgaaggcgtacccg
gcgctggtagacgagggcagcagcgtcgcggtgcggctcttcgacaccgaggccgagcag
ctgtcggccatgtgggccggcacccgccgcctcatcctgctcaacatccccaccaaccct
gccaagttcgcccaggacaagctcagcaaccaacagaagctggcgctctcccgcaacccc
cacggctccatcgcggcgctcttcgaggactgcgtgaccgccgccgcggaccggctgatc
gcggcccggggcggcccggtgtgggacgaggagtcgttccgcaagctgttcgaggcggtg
cgggccgacctggtggaggcgacgctgaagaccatccagcaggtgcaggaggtgctggcc
gcctggcaggcgtgcgagcgccggctgaaggcgaccgccttcccctcgctgctgccgtcg
ctggcggacgtcaaggagcagctggccgcgctgatcaagccgggcttcgtgaccgcgcac
ggcgccaagcggctgccggacctgatgcgctacctggtcgccgtcgaccgccgcctgacg
cagctgcccaccaacgccgaacgggaccgcagccggatggcgaaggtgaaggagatgcag
gacgaatacgcctggctgctggagcagttcccccaggggcgtccggtgccggccgcggcc
cgggagatccgctggatgatcgaggaactccgggtgagctacttcgcgcacgccctgggg
acggcctacccggtctccgacaagcggatcatgaaggcggtggacgccgcggcgccgtag
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