Streptomyces noursei ATCC 11455: SNOUR_22650
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Entry
SNOUR_22650 CDS
T04806
Name
(GenBank) RNA ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
snr
Streptomyces noursei ATCC 11455
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snr03016
]
SNOUR_22650
Enzymes [BR:
snr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SNOUR_22650
Transfer RNA biogenesis [BR:
snr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SNOUR_22650
Prokaryotic type
tRNA splicing ligases
SNOUR_22650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF2538
Motif
Other DBs
NCBI-ProteinID:
ANZ17803
LinkDB
All DBs
Position
5135556..5136749
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AA seq
397 aa
AA seq
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MSYTEVPGAQVPIRMWADPATVEGVAMQQLRNVATLPWIQGLAVMPDVHFGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTADDLPADLSRLRSRIEQVIPVGRGMHDDPVDPR
RIHGFPAAGWDDFWGRFDGVAEAVKFRHERAAKQMGSLGSGNHFIEFCLDETGSVWLMLH
SGSRNIGKELAEYHIEQARKLPHNQGLVDRDLAVFIADTPQMAAYRNDLFWAQEYARHNR
DVMMALYQDVVRKEFHKARPVFEPVISCHHNYVAEETYEGVELLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVRGLGNAASFNSASHGAGRKMSRNAAKKRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVMEQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaagtgcccggcgcccaggtgccgatccggatgtgggccgacccggcc
acggtcgagggcgtcgcgatgcagcaactgcgcaacgtcgccacgcttccgtggatccag
gggctggccgtgatgccggacgtgcatttcggcaagggggccaccgtcggctcggtcatc
gcgatgcgcggggcggtctgcccggccgccgtcggcgtggacatcggctgcggcatgagc
gcggtcaagacctcgctcaccgccgacgacctgcccgccgacctctcccgtctgcgctcc
cgcatcgagcaggtgattccggtcggccgggggatgcacgacgatcccgtggacccgcgc
cggatccacggcttccccgccgccggctgggacgacttctggggccgcttcgacggggtg
gccgaggcggtcaagttccggcacgagcgggccgccaagcagatgggttcgctggggtcc
ggcaaccacttcatcgagttctgcctcgacgagaccggctcggtctggctgatgctgcac
tccggctcccgcaacatcggcaaggagctcgccgagtaccacatcgagcaggcccggaag
ctgccgcacaaccaggggctggtcgaccgcgacctcgccgtcttcatcgcggacaccccg
cagatggcggcgtaccgcaacgacctcttctgggcgcaggagtacgcccggcacaaccgg
gacgtgatgatggccctgtaccaggacgtcgtccgcaaggaattccacaaggcccggccg
gtcttcgagccggtgatctcctgccaccacaactacgtggcggaggagacctacgagggc
gtggaactgctggtgacccgtaagggcgcgatccgggccggcagcggcgactacgggatc
atcccgggctcgatgggcaccggctcgtacatcgtccggggcttggggaacgcggcgtcc
ttcaactccgcctcgcacggcgccggccgcaagatgagccggaacgccgcgaagaagcgc
ttctccacgcgtgacctggaggagcagacgcggggcgtggagtgccgtaaggactccggc
gtcgtcgacgagatccccggcgcctacaagccgatcgagaaggtcatggagcagcagcgg
gacctcgtggaggtcgtcgccaagctcaagcaggtcgtctgcgtcaaggggtga
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