Streptomyces noursei ATCC 11455: SNOUR_23900
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Entry
SNOUR_23900 CDS
T04806
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
snr
Streptomyces noursei ATCC 11455
Pathway
snr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOUR_23900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snr03019
]
SNOUR_23900
03400 DNA repair and recombination proteins [BR:
snr03400
]
SNOUR_23900
Enzymes [BR:
snr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNOUR_23900
Messenger RNA biogenesis [BR:
snr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SNOUR_23900
DNA repair and recombination proteins [BR:
snr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNOUR_23900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ANZ18049
LinkDB
All DBs
Position
complement(5393062..5395047)
Genome browser
AA seq
661 aa
AA seq
DB search
MDVDVAAEGAREAGEAVQVLRRVFGYDAFRGDQQEIIEHVIGGGDAVVLMPTGGGKSLCY
QIPSLVRPGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDFEERRLVEAEFLAGELD
LLYLAPERLRVEQTVQLLDRGKISLFAIDEAHCVAQWGHDFRPDYLALSMLHDRWPDVPR
LALTATATQATHTEITSRLRLDEARHFVASFDRPNIQYRIAAKSEPKRQLLDLLRGEHSG
DAGIVYCLSRASVEKTAQFLVDNGIDAVPYHAGLDARVRAENQARFLREDGLVVVATIAF
GMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQRKMIDGSE
GDDAHRRRLSAHLDAMLALCETAACRRVRLLAYFGQESTPCGNCDTCLTPPETWDGTVPA
QKLLSTVVRLKRERGQKFGAGQIIDILLGRKTAKVIQFDHDALSVFGIGEDLREAEWRGV
VRQLLAQGLLAVEGDYGTLVLTEASGEVLRGQREVPMRREPEKPARAAKAKTKGKRAPVD
LPEEALPVFETLRGWRGRTAKEQGVPAYVIFHDATLREIAVTRPTSIAELGTISGVGESK
LAKYGEPILEVLTGGGAADAGTDTDEGTIERASGTAAAASAGAAAIEEDEVLPEPPDDID
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtggacgtagcggcggaaggtgcccgggaagcgggcgaggcggtgcaggtgctg
cgccgggtgttcgggtacgacgcgttccgcggggatcagcaggagatcatcgagcatgtg
atcgggggcggggacgcggtcgtcctgatgcccaccggcggcgggaagtcgctgtgctac
cagatcccgtcgctggtgcggccgggcgtcggggtggtgatctcgccgctgatcgcgttg
atgcaggaccaggtcgatgcgctgcgggcgctgggagtgcgggccgggttcctcaattcg
acgcaggatttcgaggagcggcggctggtcgaggccgagttcctggccggggagctggat
ctgctgtatctggcgccggagcggctgcgggtcgagcagacggtgcagctgctggaccgc
gggaagatctcgctgttcgccatcgacgaggcacactgtgtggcgcagtggggccacgac
ttccggccggactacctggcgctgtcgatgctgcacgaccgctggccggacgtgccgcgg
ctcgcgctgaccgcgacggcgacgcaggccacgcacaccgagatcacctcccgactgcgg
ctggacgaggcccggcacttcgtggccagcttcgaccggcccaacatccagtaccggatc
gcggccaagagcgagcccaagcggcagctgctggacctgctccgcggggagcactccggg
gacgccgggatcgtgtactgcctgtcccgggcctcggtcgagaagaccgcgcagttcctg
gtggacaacgggatcgacgcggtgccgtaccacgcggggctggacgcccgggtgcgcgcg
gagaaccaggcgcggttcctgcgggaggacggcctggtcgtcgtcgccaccatcgcgttc
gggatgggcatcgacaagcccgatgtgcggttcgtggcccatctggatctgccgaagtcg
gtggaggggtactaccaggagaccgggcgcgcggggcgggacggccagccgtccacggcc
tggctggcgtacgggctgcaggacgtggtgcagcagcggaagatgatcgacgggtcggag
ggggacgacgcgcaccggcgccgcctgtccgcccacctggacgcgatgctggcgctgtgc
gagacggcggcgtgccggcgggtgcggctgctggcgtacttcggccaggagagcaccccg
tgcggcaactgcgatacgtgcctcacgccgccggagacttgggacgggacggtgccggcg
cagaagctgctgtcgacggtcgtgcggctcaagcgcgagcgggggcagaagttcggggcg
ggccagatcatcgacatcctgctcgggcggaagaccgccaaggtcatccagttcgatcat
gacgcgctgagcgtcttcggcatcggcgaggatctgcgcgaggccgaatggcggggcgtg
gtgcggcagttgctcgcccaggggctgctggccgtggagggcgactacggcacgctggtg
ctcaccgaggcgagcggtgaggtgctgcgcggccaacgcgaggtgccgatgcggcgggag
ccggagaagccggcgcgggcggccaaggcgaagaccaagggcaagcgggcgccggtggac
ctgccggaggaggcgctgccggtcttcgagacgctgcgcggctggcgcggccgtacggcc
aaggagcagggcgttcccgcgtatgtgatcttccatgacgcgacgctgcgggagatcgcg
gtgacgcggccgaccagcatcgccgagctgggcacgatcagcggagtcggcgagagcaag
ctcgccaagtacggggagccgattctggaggtgctgaccggaggcggcgccgcggacgcg
ggcacggacacggacgaggggacgatcgagcgggcgtcggggacggccgcggcggcgtcg
gcaggcgcggcggcgatcgaggaggacgaggtgctgccggagccgccggacgacatcgac
tggtga
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