Sneathia vaginalis: VC03_02045
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Entry
VC03_02045 CDS
T03854
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sns
Sneathia vaginalis
Pathway
sns03420
Nucleotide excision repair
sns03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VC03_02045
03430 Mismatch repair
VC03_02045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sns03400
]
VC03_02045
Enzymes [BR:
sns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC03_02045
DNA repair and recombination proteins [BR:
sns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VC03_02045
MMR (mismatch excision repair)
Other MMR factors
VC03_02045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
AAA_12
Beta-prop_WDR5
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKC95342
UniProt:
A0A0E3ZAP5
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All DBs
Position
complement(415250..417358)
Genome browser
AA seq
702 aa
AA seq
DB search
MNILDNLNDMQRKASEKIDGPSLILAGAGSGKTRTVTYKIAHMVKECNIDPESILALTFT
NKAANEMKERIHDLIGEDANKMIISTFHSFSVRMLRIYGKSIGFTSNFNIYDADDSKSLI
KKIVKNLNYAQTPSSFYTRISKSKENGVTVKNFENEIDLKIKDNREFYEVLKQYQETLIK
NNCMDFTDILLNCKALLDDNTVLEKIQNKFKYILVDEYQDTNNIQYQIVTKLAKKYKNLC
VVGDEDQSIYAFRGADINNILNFKKDYPNALIVKLEQNYRSTSNILNLANSVISKNTSSL
GKALWTKNDTGKLPNLYEATDPYDEARHICEIIKESKEKYGNFTILYRMNAQSRVLEQEL
NRNGINCKVYGGLSFYQRKEVKDLLSYLMFLNNPEDVVSFERCISNPKRKIGSKTQEKII
SFARDNGISLLDAMQYDNTSKVKDFYNLMSDLYDKKDNIMLSGLMQEIIEKTHYLEYVAT
LDNPDEKRANVYELLNSIKEAQKVDENLTLDEYLTFTSLSSTTDSINEDNIVKLMTIHSS
KGLEFNTVFLAGFESNLFPTNSNLNDISSLEEERRLCYVAITRAKKELYLSYCKNRTFNG
LTENFKSVSHFYYDMDKKYIEHVNAKKNTENVSEHIIENFNPVRNKKQTVETAFSTFKVG
QTVNHLAYGRGTIKKIDDKSLTIDFIIGEKKISLLLADRFLK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattagacaatttaaatgacatgcaaagaaaagctagtgaaaaaatagatgga
ccttcccttatactagctggagctggtagtggtaagacaagaaccgtaacatacaaaatc
gcacatatggtaaaagaatgcaatatagatccagaatctatcctagcacttacatttact
aataaggctgctaatgaaatgaaagaaagaattcatgatttaataggcgaagatgctaat
aagatgataatttctactttccactcattctcagttagaatgcttagaatctatggtaaa
agcattggtttcacaagtaatttcaatatctatgatgctgatgactcaaaaagtttaatt
aagaaaatcgtaaaaaatttaaactatgcacaaacaccttctagcttttacacaagaatt
tcaaaatctaaagaaaatggcgttacagttaaaaattttgaaaatgaaatagacttaaaa
attaaggataatagagaattctatgaagtcctaaaacaatatcaagaaacattgataaaa
aacaactgtatggattttacagatatactattaaattgtaaagccttactagatgacaat
actgtcttagaaaaaatacaaaataagtttaaatatatattggttgatgaataccaagat
acaaacaatatacaatatcaaatcgtgacaaaattagctaaaaaatacaaaaatctatgt
gtcgtaggtgatgaagatcaaagtatttatgcattccgtggtgctgatataaataacata
ttaaatttcaaaaaagattacccaaatgcattgatagtaaaattagaacaaaactataga
tctacatctaacatattaaatcttgcaaattctgttatctctaaaaacacatcatcactt
ggtaaggctttatggacaaaaaatgatactggtaaattacctaatctttatgaagcaaca
gacccctatgatgaagcaagacatatttgtgaaataataaaggaatcaaaagaaaaatat
ggtaatttcacaattctttacagaatgaatgctcaatcacgtgtattagaacaagaacta
aatagaaatggtataaattgtaaggtatatggaggattatcattctatcaaagaaaagaa
gtaaaagaccttttatcgtaccttatgtttttaaataaccctgaggatgttgttagtttt
gaacgttgtatttcaaatccaaaaagaaaaatcggaagtaagacacaagaaaaaataata
tcttttgcaagggataacggtatcagtctattagatgctatgcaatatgataatacaagt
aaagtaaaagatttttataacttaatgagtgacttatacgataaaaaagataatataatg
ttaagtggtttaatgcaagaaattatcgaaaaaactcactatttagaatatgttgctaca
cttgataatcctgatgaaaaaagagctaatgtatatgaattattaaattcaataaaagaa
gcacaaaaagttgatgaaaatcttacactagatgaatatttaactttcacatcattatct
agtacaacagatagtattaatgaagataatatagtaaaacttatgactatacacagctca
aaaggtcttgaatttaacacagtctttttagctggttttgaatctaatttattccctact
aattctaacctcaatgatattagtagtcttgaagaagaaagaagactttgttacgttgca
attacacgtgcaaaaaaagaactatacttaagttattgtaaaaatagaacatttaatggt
ttaacagaaaactttaaatctgtttctcatttctactatgatatggacaaaaaatatata
gaacatgtaaatgctaagaaaaatacagaaaatgtatcagaacacataatagaaaacttt
aatcctgtaaggaataagaaacaaacagtagagactgctttttcaacatttaaagtggga
caaactgtaaatcatttagcttatggtcgtgggactataaaaaagattgatgataagagt
ctaacaatagactttattataggcgaaaagaaaatttccctattacttgcagatagattt
ttaaaatag
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