Sneathia vaginalis: VC03_02375
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Entry
VC03_02375 CDS
T03854
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sns
Sneathia vaginalis
Brite
KEGG Orthology (KO) [BR:
sns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sns03016
]
VC03_02375
Enzymes [BR:
sns01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VC03_02375
Transfer RNA biogenesis [BR:
sns03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VC03_02375
Prokaryotic type
VC03_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AKC95394
UniProt:
A0A0E3UTR0
LinkDB
All DBs
Position
complement(479237..479956)
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AA seq
239 aa
AA seq
DB search
MDIRMVYSYDGSKFYGMQRQKNKITVQGEIERVIFEVFNEKINLISSGRTDRGVHALMQV
SNFKISKTIPPIAIKKQLNKALYGKIKVYNIDIVDKDFNSRYMATYRTYLYRLKYIDDIS
PFEASYISEIRKDIDIEKINKKLALFVGEHDFTLYSKSDKDQKNPVRKIYSANCVKINDE
FQIIIKGNSFLKSMIRLIVASCIYEDEKTIINKLNGIGNGPKKILSPNGLYLKEVCYDN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggatataaggatggtatactcttatgatggaagtaaattctatggtatgcaaagacaa
aagaataagattacagttcaaggtgaaatagaaagagtaatatttgaagttttcaatgag
aaaataaacttaattagctctggaagaactgatagaggtgtacacgcattaatgcaagta
tcaaattttaaaatatctaaaactatccctcctattgctattaaaaagcaacttaataaa
gctctttatggtaaaataaaggtctataacattgatattgtagataaagactttaattct
agatatatggctacttacagaacatatttatatagattaaaatatattgatgatatatca
ccttttgaagcttcatatatatctgaaatacgaaaagatattgatattgaaaaaataaat
aaaaaactagctttatttgttggtgaacatgattttacactttattctaaatctgataaa
gaccaaaaaaatccagtcagaaagatttattctgctaattgtgtaaaaattaatgatgag
tttcagattataataaaaggtaatagttttttaaaatctatgataagactaattgtagct
tcttgcatatatgaagatgaaaaaactataataaataagcttaacggtataggtaatgga
cctaaaaaaatattatcccctaatggtctatacctaaaagaggtatgttatgataattaa
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