Sneathia vaginalis: VC03_02485
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Entry
VC03_02485 CDS
T03854
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sns
Sneathia vaginalis
Pathway
sns03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sns00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VC03_02485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sns03021
]
VC03_02485
03400 DNA repair and recombination proteins [BR:
sns03400
]
VC03_02485
Enzymes [BR:
sns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VC03_02485
Transcription machinery [BR:
sns03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VC03_02485
DNA repair and recombination proteins [BR:
sns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VC03_02485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
IMS_HHH_1
Motif
Other DBs
NCBI-ProteinID:
AKC95413
UniProt:
A0A0E3UUM3
LinkDB
All DBs
Position
496923..497879
Genome browser
AA seq
318 aa
AA seq
DB search
MLNIEKIAKNIKLTEEKVNQYSAIYTLEPLYRGYGNTIGNALRRILLSSIPGSAIKGIKI
DGVLNEFTTLDGVKEAVTDIILNVKEIIIELDEPGEKRMSLSVKGPKVVTAADIKTEMGI
NIINPDQVIATLTTDREFNMEFLVDSGEGFVVSDEIDKEGWEINFLAIDAIYTPIKKVNY
IVKDTMVGRVTNYDKLILEIETDGSVEIHDALSYAVELLITHVNPFTNIGNSMSKYRKDD
EEEELVAPRGEINSYADLRIDELQLSVRASNGLKRAKINTIGDLSKMSLAELEKVKNLGK
VSLKEIIEKLKEYGFNIE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatatagaaaagatagctaagaatattaagttaacggaagaaaaggtaaatcaa
tactcagcaatttacacattagaacctttatatagaggatatggtaatacaataggaaat
gctttaagaagaattttattatcgtcaatacctggatctgctataaagggtattaaaata
gatggtgttttaaatgaattcacaactttagatggtgtaaaagaagctgttactgatatt
attttaaatgttaaagaaataataatagagcttgatgaacccggtgaaaaaagaatgtcg
ttatcagttaagggtccaaaagttgtaactgcagcagatataaaaacagaaatgggaata
aatataataaaccctgatcaagttatagcaactttaacaactgacagagaattcaatatg
gaatttttagtagattctggagaaggattcgtagtttcagatgaaattgataaagaaggt
tgggaaataaatttcttggcaattgatgcgatatatacaccaataaaaaaagtaaattat
atagtaaaagatacaatggttggacgtgtaactaattatgataagttgatacttgaaata
gaaacagatggaagtgtagaaatacatgatgcactatcatatgcagttgaactattaata
acacacgtaaatccatttacaaatattggaaattcaatgtctaaatatagaaaagatgac
gaagaagaagaattagttgcaccaagaggtgaaataaattcttatgcagatttaagaata
gatgaattacaattatctgttagagcaagtaatggtttaaagagagctaaaataaatact
ataggagatttatctaagatgagtttagctgaacttgaaaaagttaagaatctaggtaag
gtatcactaaaggaaattattgaaaagcttaaggaatacggctttaacatcgaataa
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