Sneathia vaginalis: VC03_04655
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Entry
VC03_04655 CDS
T03854
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sns
Sneathia vaginalis
Pathway
sns03030
DNA replication
sns03430
Mismatch repair
sns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VC03_04655
03430 Mismatch repair
VC03_04655
03440 Homologous recombination
VC03_04655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sns03032
]
VC03_04655
03400 DNA repair and recombination proteins [BR:
sns03400
]
VC03_04655
Enzymes [BR:
sns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VC03_04655
DNA replication proteins [BR:
sns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VC03_04655
DNA repair and recombination proteins [BR:
sns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VC03_04655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AKC95781
UniProt:
A0A0E3ZBW5
LinkDB
All DBs
Position
complement(931541..934498)
Genome browser
AA seq
985 aa
AA seq
DB search
MYINLKVYTDYTLLEGVGKISDYVKKVSELGLKGLGLVDKSMCSAMKMYNLCKKNNINLL
MGLTVFVYGVKREGKYILTLYAKGEKGYKELVNLSSLSYVKKGVLDISDISKCNNILVTT
GSLNSEVYVLMKDLEYSNVREVLKEYSSKFKDIYLELPCFLNDEKRLVKYIEISKEMDVE
LIAVNDTFYLQKEDRKLQKIVARIGNKKGYEEKGLYFKTEEEIREDLSFLDKNILDKAIE
NTEKILEEYKMELDLSSKKVPKLQFDIPQEQYLKNLVYDNLAKKYTKRYDEAKKRADYEL
EIISKMGFNGYFLIVEDIVRYARQNDILVGPGRGSASGSIVSYLLGITKVDPLKYDLMFE
RFLNIARKNMPDIDLDFETAKKDKIIQYVMDKYGKDYVSNIITFSTMKEKALIKDLKRVF
KNRENKYVIDEVVEKLKGNVRHSSIHPSGVIISSEKLTDIVPINFDSLLNVNITQYQMEE
LETMGLLKMDFLSLSNLDILSSCTKLTNVKLDDIPLDDKNTFEEYNKGKTLGIFQVEARG
ITELIKRYIINEFQDISTVLALYRPGPLKSGMIDKLISIKNGNGKVEYLFPQLEEVLSST
YGVIIYQEQVMKIARIIAGFDLNEADDLRKAISKKKMDILENYKKRFIEDSVNRGFDRYK
VEVLYNQIEKFGEYGFNKSHTIPYAMLSYYTAYFKTNYTKEFFCSYLNSQLGIHDNLKDV
AKEVNILKPDINLSDVKFTVEKDGIRYGLCNISGISVSFSNDILNERKKGKFLNILDFCY
RLLEYGITKKQCQILADAGVFDSLGITRKEVVLNVDEIYSMALKKKEQKEDVCRTIFFDD
KKDDVKYIQKDTKEYEILELLDMEEKMLGLKLSFPREEVLDVIKNKHIFLSEYNLVLKNG
LLVKLSEIGKHKASITNILLDNVDEDNLGKLKKYILKNGGYSKVVFYKQKQKLPTKTNRY
IYLSKKNIEELISIVGKNNLRIELK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaatcttaaagtatatactgactacacccttttagaaggtgtaggtaagata
agtgattatgttaaaaaagtcagtgaattagggttaaaaggactaggtctagtagataag
tctatgtgctcagctatgaaaatgtacaatttgtgcaagaaaaacaacattaatctttta
atgggactaacagtttttgtgtatggtgtaaaaagagagggtaaatatattttaactctt
tatgcaaaaggagaaaaagggtataaggaattagtgaatttatcaagtctatcatacgtg
aaaaaaggtgtattagatatatctgatatatcaaaatgcaataatatattagtaactaca
ggttcacttaattctgaggtatatgttttaatgaaggacttagaatattctaatgtaaga
gaggtattaaaagaatattctagtaaatttaaggatatttacttagaattaccatgtttt
ttaaatgacgaaaaaagactagtaaagtatatagagatatcaaaagaaatggatgtagaa
ttaatagcagttaatgatacattctatttacaaaaagaagacagaaagttacagaaaata
gttgcaagaataggtaataagaaggggtatgaagaaaaaggcctttactttaagactgaa
gaagaaataagggaagacttaagttttttagataaaaatattttagataaggctatagaa
aatacagaaaaaatattagaagagtacaagatggagttagacttatctagtaaaaaagta
cccaaattacagtttgatatacctcaagaacagtatttaaaaaatttagtgtatgacaac
ttagcaaaaaaatatactaaaagatatgatgaagctaaaaaaagagctgattatgaacta
gagataatatcaaagatgggatttaatggatattttttaatagttgaagatatagtaagg
tatgcaagacaaaatgatatattagtagggcctggaagaggtagtgctagtggtagtata
gtttcgtatctattaggtattacaaaggtagacccattaaaatatgaccttatgtttgaa
agatttttaaatattgcaagaaagaatatgcctgatatagacctagactttgaaacagca
aaaaaagacaagataatacagtatgtaatggataagtatggtaaagactacgtttcaaat
attataaccttttctacaatgaaagaaaaagctctaataaaggatttaaaaagagtattt
aaaaatagagaaaataaatatgtaatagatgaagttgtagaaaaacttaagggtaatgtt
agacatagttccatacacccatcaggtgtaataatatctagtgaaaagttaacagatata
gttcctattaattttgatagtttacttaatgttaatataactcagtatcaaatggaagag
ttagaaactatgggacttttaaagatggatttcttatcgttgtcaaaccttgatatatta
agttcatgtacaaagttaactaatgtgaaattagatgatatacccctagatgacaagaat
acttttgaggaatataacaaggggaagactttgggtatatttcaagtagaagcaagagga
ataacagagttaattaaaagatatataataaatgagtttcaagatatatctacagtttta
gcactatacagaccaggaccattaaaaagcggtatgattgataagttaataagtataaaa
aatggtaatggtaaggtagagtatttattcccacaattagaagaagttttaagctcaact
tatggtgtaataatttatcaagaacaggttatgaaaatagcaagaataattgcaggcttt
gatttaaatgaagcagatgacttgagaaaagcaataagtaagaaaaagatggacatactt
gaaaactataaaaaaagatttatagaagactcagttaatagaggatttgatagatacaag
gtagaagttttgtataatcaaattgaaaagtttggagaatatggatttaataagtcacat
accataccttatgcaatgctctcatattatacagcgtattttaagactaattatacaaaa
gaattcttctgctcatacttaaattctcaattaggtatacatgataatctaaaagatgta
gcaaaagaagttaatatattaaagccagatattaatttatcagatgtgaaatttaccgta
gaaaaagatggtatacgttatggactatgcaatatatctggtatatcggtatcgtttagt
aatgatatattaaatgagagaaaaaaaggtaagtttttgaatattcttgatttttgctat
agactacttgaatatggtataacaaaaaaacagtgtcaaatattagctgatgcaggagtt
tttgatagcttgggaataacaagaaaagaagtcgttttgaatgttgatgagatatatagc
atggcattaaagaaaaaagaacaaaaagaagatgtatgtaggacaatattttttgatgat
aaaaaggatgatgttaaatacatacaaaaagatacaaaagagtatgaaatattagaacta
cttgatatggaagaaaaaatgcttggtttaaaattaagttttcctagagaagaagtgtta
gatgtaataaagaacaaacatatctttttaagtgaatataatctggttttaaaaaatgga
ttattagtaaaattaagtgagataggaaagcataaggcaagtataaccaatatactacta
gacaatgtagatgaggataatttgggaaaattaaaaaaatatatattaaaaaatggtgga
tactcaaaggtagttttctataagcaaaaacaaaaattacctacaaaaactaatagatat
atatatttatctaagaaaaacattgaagaattaataagtatagtgggtaaaaataattta
cgtattgagttgaaataa
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