Sneathia vaginalis: VC03_06295
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Entry
VC03_06295 CDS
T03854
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sns
Sneathia vaginalis
Pathway
sns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VC03_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sns03400
]
VC03_06295
Enzymes [BR:
sns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC03_06295
DNA repair and recombination proteins [BR:
sns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC03_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PriA_3primeBD
PriA_C
AAA_30
SLFN-g3_helicase
AAA_19
T2SSE
DUF87
Zn_ribbon_PriA
PIF1
Viral_helicase1
NADH-UOR_E
Flavi_DEAD
TrwB_AAD_bind
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AKC96073
UniProt:
A0A0E3UV94
LinkDB
All DBs
Position
complement(1293120..1295039)
Genome browser
AA seq
639 aa
AA seq
DB search
MYYNIQLKKMNMLFTYQSDEEIKLGTYCVVDYNNKKMEGIVVEKVNVLKKEFSIKNIEKV
LDKRLDEKLFSLMQFIHNYYIEPYGNLLSIIEKPEKKEYKDIKENNTKIEEVHLSDEQQK
VYLDIVNSSKTVHLINGVTGSGKTQIYIKLIQKALKEDGSAILLVPEITLTSQLKKNLEK
ALGQNIALWHSKLTKNAKIKYFNLIEEKKIRVILGARSAIFSNLSNLKYIIIDEEHESTY
KQDEAPRYHVKNVAIKRALLENAKVVLGSATPSFETMYQVKNKDIEEHILKNRYNGAKLP
EYIVKDISEEKDFLTDELIERINEKLKNKEQVILLLNRKAYSIILKCRDCKKNMECDICT
FSLTYYKNNILKCNQCGKTYKMITRCKYCGSEKLEKKGTGTEKLEERLKEIFDEDRILRM
DADSMTSKTKIDKAYQDFLNNKYDILIGTQILAKGFHFPNVTLVGILNADQMLSYPDYRA
YERSYQLIAQASGRSGREGKKGQVFIQTYDKDSILINSIITNDYNLIYEEQMKLREKLGY
PPYKKHIKILFTDTNENRLNKIASSCYQYILNKLGTYAKIYPVAKCMVYKASKRYRVNIN
ILYDRKNDKVIKKIIRKLIENRNRIVTRILVDVDPNNML
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtactataatattcaattaaaaaaaatgaatatgctattcacataccaaagtgatgaa
gaaataaagcttggaacatactgtgtagttgactataataacaaaaaaatggaaggtata
gtagttgagaaagtaaatgtattaaaaaaagagtttagcataaagaacatagaaaaagtg
ctagataaaagactagatgaaaagcttttttcgctaatgcaatttatacacaactactat
atcgaaccatatggtaatttacttagtataatagaaaaaccagaaaaaaaagaatataaa
gatataaaagagaataacacaaaaatagaagaagtacatttaagtgatgaacaacaaaaa
gtatatttggatatagttaattctagtaagacagtacatctaataaatggtgtaactggt
agtggtaagacacaaatatatattaagttaatacaaaaagctttaaaagaagatggtagt
gccatactattagttccagaaataacacttacaagtcaattaaagaaaaatttggaaaag
gcacttggtcaaaatattgccttatggcatagtaaattaactaagaacgcaaagataaag
tactttaatctcatagaagaaaagaaaataagggtaattttaggagctagatctgcaata
tttagtaatctttctaatttaaagtatataataatagatgaagagcatgaaagtacatac
aaacaagatgaagcaccaagatatcatgtaaaaaatgttgcaataaaaagggcattactt
gaaaatgcaaaagtagtattaggttctgcaactccttcatttgaaactatgtatcaggtg
aaaaataaggacatagaagagcatatattaaaaaatagatataatggagcaaaattacct
gagtatatagtaaaagatattagcgaggaaaaagattttttaactgatgaattaatagaa
agaattaatgaaaaattaaaaaataaagaacaggtaatactattacttaatagaaaggca
tattcaattatcttaaagtgtagagactgtaaaaaaaatatggaatgtgatatatgtact
tttagtctaacgtactataaaaacaacattctaaagtgcaatcaatgtggtaagacatat
aagatgattacaagatgtaagtactgtggtagtgagaagttagaaaaaaaaggtacaggt
acagaaaagttagaggaaagattaaaagaaatttttgatgaggatagaatattaagaatg
gatgcagattctatgacaagtaaaacaaaaatagataaagcttaccaagattttttgaat
aataagtatgatattctaataggaactcaaatattagcaaaaggatttcactttccaaat
gttactttagttggtatactaaatgctgatcaaatgttatcgtatccagattatagggca
tatgaaagaagttatcagttaatagcacaagcttcaggtagatcaggtagagaagggaaa
aaaggacaagttttcattcaaacatatgataaagattcaattctaataaactctataatc
accaatgactataacctaatatatgaagaacaaatgaagctaagagaaaaattgggttat
ccaccatataagaaacacataaaaatattatttaccgatacaaatgaaaatagacttaat
aaaatagctagtagttgttatcaatatattttgaataaactagggacttatgctaaaata
tatcctgtggcaaagtgtatggtatataaggcaagtaaaagatatagagttaatataaac
atactatatgacagaaaaaatgataaggtaataaagaaaattattagaaaattaatagaa
aatagaaataggatagttacaaggatattagtagatgtagatccaaataatatgctatag
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