Streptococcus pneumoniae SPNA45 (serotype 3): SPNA45_01583
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Entry
SPNA45_01583 CDS
T02245
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
snu
Streptococcus pneumoniae SPNA45 (serotype 3)
Pathway
snu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
snu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPNA45_01583 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snu03021
]
SPNA45_01583 (rpoE)
03400 DNA repair and recombination proteins [BR:
snu03400
]
SPNA45_01583 (rpoE)
Transcription machinery [BR:
snu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPNA45_01583 (rpoE)
DNA repair and recombination proteins [BR:
snu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPNA45_01583 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
CCM08868
LinkDB
All DBs
Position
complement(1609994..1610593)
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AA seq
199 aa
AA seq
DB search
MRRNALELEVFAGQEKSELSMIEVARAILELRGRDHEMHFSDLVNEIQNYLGTSNSDIRE
ALPLFYTELNFDGSFISLGDNKWGLRSWYGVDEIDEEIIALEENDDDEVAPKAKKKRVNA
FMDGDSDAIDYNADDPEDEDAYEADPALSYDDENPDDEKNEVEAYDAEINEIAPDDLGED
VDLNEDDEFSDDDAETSEE
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaacgctttggaattagaagtatttgctgggcaagaaaaaagtgaactatct
atgattgaggtagcgcgtgctatcttggaacttcgtggtcgcgatcatgagatgcatttt
agcgatcttgtaaacgaaattcaaaactaccttggaacatcaaacagcgatatccgcgaa
gctttgcctttgttctacacagagttgaactttgacggtagcttcatctcacttggggac
aacaaatggggtcttcgttcatggtatggtgtggacgaaatcgacgaagaaatcatcgct
cttgaagaaaatgacgacgatgaagtagcaccaaaagctaagaaaaaacgtgtcaatgcc
tttatggatggtgattcagatgccattgactacaatgcagatgatccagaagacgaagat
gcatacgaagcagatccagctctttcatacgatgatgaaaatccagatgatgaaaaaaat
gaagtggaagcttatgatgcagaaatcaacgaaatcgctccagatgacttgggagaagat
gtggatctcaacgaagacgacgagttttcagatgacgacgctgaaaccagcgaggaataa
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