Streptococcus pneumoniae SPNA45 (serotype 3): SPNA45_01907
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Entry
SPNA45_01907 CDS
T02245
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
snu
Streptococcus pneumoniae SPNA45 (serotype 3)
Pathway
snu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPNA45_01907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snu03019
]
SPNA45_01907
Messenger RNA biogenesis [BR:
snu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPNA45_01907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
CCM09191
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All DBs
Position
1930450..1932129
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AA seq
559 aa
AA seq
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MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
VNNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSQM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctgggagaa
atcgggaaaaacacttacggaattgaataccaagacgaaattatcatcgtcgatgctggg
attaaattcccagaagatgacttgcttggtatcgactatgtcattcctgattactcttac
atcgtggacaatatcgaccgcgtcaaggctgttttgattacgcacggacacgaggaccac
atcggtgggataccattcctgctcaagcaagcaaatgtcccgatctacgctggaccgctt
gccctggctttgattcgtgggaaactcgaagaacacggcctcttgcgcaacgccaaactt
tacgaaatcaaccacaacaccgagttgacctttaaaaatctcaaggcaactttctttaga
acgactcactctattccagagcctttggggattgtcattcatactcctcaaggaaaaatc
gtctgtacgggtgactttaagttcgactttactccagttggagaacctgcggacttgcat
cgtatggctgcgcttggtgaagaaggcgtgctctgtctcctgtctgactcgacaaatgcg
gaagtaccaacctttaccaactctgaaaaagtcgttggtcagtccattatgaagattatc
caaggtattgaaggacgtatcatctttgcatcctttgcctcaaatatcttccgtctccag
caggcaacagaagctgctgttaagactggacgcaagattgcggtctttggtcgttctatg
gaaaaggccattgtcaacggaatcgatcttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgaaatcaaagattatcctgcaggagaagttcttatcctctgtacaggt
agtcagggtgaacctatggcagccctctctcgtatcgccaacggaacccaccgtcaggta
caactccaaccaggcgatactgttatcttctcttcaagcccaatccctggaaacacgact
agcgttaacaaactgattaacatcatttctgaagccggtgtcgaagttatccacggtaag
gttaacaatatccatacatctggacacggtggccagcaagagcaaaaactcatgctccgc
ttgattaagccaaaatacttcatgcctgttcacggtgaatatcgcatgcaaaaagtccac
gctggactagcggtagatactggtgttgaaaaggacaatatctttatcatgagcaatggt
gatgtgcttgcccttactgctgactctgcccgtatcgcaggtcatttcaacgcccaagat
atctatgtcgacggaaatcgtatcggtgaaatcggcgctgctgtcctcaaagatcgtcgc
gatctatctgaagacggtgtcgttctggcagttgcaactgttgacttcaagtctcagatg
attctgtctggcccagacatcctcagccgaggctttgtctacatgagagagtctggcgac
ttgattcgccaaagccagcgtatcctcttcaatgccattcgtatcgcactgaaaaataag
gatgctagcgtgcaatctgtcaatggtgccattgtcaacgctattcgccccttcctctat
gaaaataccgaacgtgaaccgatcatcatcccgatgatcctcacaccagatgaagaataa
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