Streptomyces niveus: BBN63_07795
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Entry
BBN63_07795 CDS
T04887
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
snw
Streptomyces niveus
Pathway
snw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBN63_07795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snw03019
]
BBN63_07795
03400 DNA repair and recombination proteins [BR:
snw03400
]
BBN63_07795
Enzymes [BR:
snw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBN63_07795
Messenger RNA biogenesis [BR:
snw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBN63_07795
DNA repair and recombination proteins [BR:
snw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBN63_07795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQU66169
UniProt:
A0A1U9QQ29
LinkDB
All DBs
Position
1866805..1868976
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AA seq
723 aa
AA seq
DB search
MTNAERADLRASADSVLARLVGDATGAARLREDQWRAIEALVADKRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLLALMRNQVEAAARAGISARTINSSNSEEWETIQAEVA
AGEVDVLLVSPERLNNPDFRDQVLPALSAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
AELPPGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGALDRESLSLNVLRLPDAAH
RLAWLADHLVELPGSGIIYTLTVAAAEEVTAYLRQCGHTVTSYTGRTENADRQQAEEDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASVAFPPEELVRRTLDVLAQADRPLSLPALEPLVELRRTRLETMLKVLDVDG
AVHRVKGGWTSTGQPWVYDAERYAWVARQRQSEQQAMRDYATTTACRMEFLRLQLDDEEA
APCGRCDNCAGARFTDKVSGGALDAARGELGRPGVDVEPRKMWPTGLTAVGVDLRGRVPA
GERSFPGRALGRLSDIGWGNRLRPMLAPQSPDGPVPGDVVDAVVSVLADWAKGPGGWASG
LDDAPPRPVGVVTVASRSKPQLVGSLGSRISEVGRMPLLGTVEYAPGAEEVRISRTNSAQ
RVRALHEAFTVSPELAEALTSAAGPVLLVDDLSDTGWTLAVATRLLRRAGAEGVFPLVLA
VQT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcagaacgtgcggatctccgggcctcggccgactccgtcctcgcccgcctc
gtcggtgacgccaccggcgccgcccgcctgcgcgaggaccagtggcgggccatcgaagcg
ctcgtcgccgacaagcgcagagcactcgtcgtgcagcggacgggctggggcaagtccgcg
gtgtacttcgtcgcgacgtccctgctccgcgcccggggcagcggcccgacggtgatcgtc
tccccgctgctcgcgctcatgcgcaaccaggtggaggccgccgcccgcgcgggaatcagc
gcgcgcacgatcaattcgtccaactcggaggagtgggagacgattcaggccgaggtggcg
gccggcgaggtcgacgtgctgctggtcagcccggagcggctcaacaatccagacttccgc
gaccaggtcctgcccgcgctgtcggcggccaccggcctgctggtggtggacgaggcccac
tgcatctccgactggggccacgacttccgccccgactaccgccggctgcgcacgatgctc
gccgagctgccgcccggcgtcccggtgctggccaccacggcaacggcgaacgcgcgggtg
acggccgatgtcgccgagcagctgggcacgggcgcggggacggacgcgctcgtgctgcgc
ggagcactggacagggagagtctgagtctcaacgtgctcaggctgccggatgccgcgcac
cggctggcctggctggccgatcatctggtcgagcttccgggctccgggatcatctacacc
ctcacggtcgcggcggccgaggaagtcaccgcctatctgcgccagtgcggccacacggtc
acgtcgtacacgggccgcacggagaacgcggaccggcagcaggccgaggaggacctcctc
gccaaccgggtaaaggcgctcgtcgccacgtccgcgctgggaatggggttcgacaagccc
gacctcggattcgtcgtccacctcggctccccctcctcccccatcgcctactaccagcag
gtgggccgtgccgggcgcggagtggagcatgccgaggtgctgctgctccccggcaaggag
gacgaggcgatctggcagtacttcgcctccgtcgccttccctcccgaggaactcgtccgg
cgcacgctcgacgtcctggcgcaggcggaccggcccctctcactgcccgctctcgaaccg
ctggtcgagctgcggcgcacacggctggagacgatgctcaaggtgctcgacgtggacggc
gcggtgcaccgggtcaagggcggctggaccagcaccgggcagccctgggtgtacgacgcg
gagcggtacgcgtgggtggcccgccagcggcagagcgagcagcaggccatgcgggactac
gcgacgacgacggcgtgccggatggagttcctgcggctccaactggacgacgaggaggcc
gcgccgtgcggccggtgcgacaactgcgcgggggcgcggttcacggacaaggtctccggt
ggtgcgctggacgccgcccggggcgagttgggcaggcccggggtggacgtggagccgcgc
aagatgtggccgaccgggctgaccgccgtgggcgtcgatctgcggggccgtgttcccgcc
ggtgagcggagtttccccggccgggcgctgggccggctctcggacatcgggtggggcaac
agactgcgcccgatgctcgcgccccagtcgccggacggtcccgtccccggcgatgtggtg
gacgccgtggtgagcgtcctcgccgactgggccaaggggcccggcggttgggcgtccggg
ctcgacgacgcaccgccgcgcccggtgggtgtcgtgaccgtcgcctcgcggagcaagccc
cagctcgtggggtcactcggcagccggatctccgaggtgggccggatgccgctgctgggc
acggtcgagtacgcgccgggcgcggaggaagtccgtatctcgcgtaccaacagcgcccag
cgggtccgggcgctgcacgaggcgttcaccgtgtcaccggagttggccgaggctctgacc
tcggccgcgggtcccgtcctgctcgtcgacgacctctccgacaccggctggacgctggcc
gtggcgacccggctgctgcgcagggccggggccgaaggggtcttcccgctggtgctcgcc
gttcagacgtga
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