Streptomyces niveus: BBN63_12570
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Entry
BBN63_12570 CDS
T04887
Name
(GenBank) RNA polymerase sigma factor ShbA
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
snw
Streptomyces niveus
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snw03021
]
BBN63_12570
Transcription machinery [BR:
snw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBN63_12570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_16
HD_5
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AQU66945
UniProt:
A0A1U9QTH1
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All DBs
Position
complement(2991434..2992009)
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AA seq
191 aa
AA seq
DB search
MRDDETTVIGALVHRAVEGDGRATHDLLAHVHPLALRYCRTRLNRLPGDARHFTEDLAQE
VCVAVLMALPRYKDTGRPFEAFVFAIAAHKVADLQRAAMRHPGSTAVPSDEMPERPDDSL
GPEERALLSSDAEWAKKLLANLPDNQRELLVLRVAVGLTAEETGQMLGMSPGAVRVAQHR
ALSRLRALAEQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacgagaccacggtgatcggtgcgctcgttcaccgtgccgtcgagggcgac
gggcgggccacgcacgatctcctggctcatgtgcaccctctcgcgctgcgctactgccgc
acccggctgaaccgactgcccggtgacgcacggcacttcacggaggatctcgcgcaggag
gtctgcgtcgccgtgctgatggcgctgccgcgctacaaggacaccggcaggcccttcgag
gcgttcgtcttcgccatcgccgcgcacaaggtcgccgatctccagcgggccgccatgcgg
cacccggggtcgacggccgtgccctcggacgagatgcccgaacggcccgacgactccctc
ggcccggaggagcgggcgctgctcagcagcgacgccgagtgggcgaagaagctcctcgcc
aacctcccggacaatcagcgcgagctgctcgtgctgcgggtcgccgtggggctgaccgcc
gaggagaccggccagatgctggggatgtcgccgggcgccgtacgggtcgcacagcaccgc
gcgctcagcagactgcgggcgctggccgagcagtag
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