Streptomyces niveus: BBN63_12605
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Entry
BBN63_12605 CDS
T04887
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
snw
Streptomyces niveus
Pathway
snw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBN63_12605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snw03019
]
BBN63_12605
03110 Chaperones and folding catalysts [BR:
snw03110
]
BBN63_12605
03029 Mitochondrial biogenesis [BR:
snw03029
]
BBN63_12605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snw04147
]
BBN63_12605
Enzymes [BR:
snw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BBN63_12605
Messenger RNA biogenesis [BR:
snw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BBN63_12605
Chaperones and folding catalysts [BR:
snw03110
]
Heat shock proteins
HSP60 / Chaperonin
BBN63_12605
Mitochondrial biogenesis [BR:
snw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BBN63_12605
Exosome [BR:
snw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BBN63_12605
Exosomal proteins of other body fluids (saliva and urine)
BBN63_12605
Exosomal proteins of breast cancer cells
BBN63_12605
Exosomal proteins of colorectal cancer cells
BBN63_12605
Exosomal proteins of bladder cancer cells
BBN63_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AQU66952
UniProt:
A0A1U9QRT0
LinkDB
All DBs
Position
complement(2997673..2999298)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVAAVSKELLDTARPIDDKSDIAAVAGLSAQDSQVGELIAEAMDKVGKDGVITVEESNT
FGLELEFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILINQGKIGSIQDLLPLLEKVIQ
AGGSRPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGATV
IAEEVGLKLDQAGLDVLGSARRVTVSKDDTTIVDGGGDSTEVAGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAAKVLEDGLGKTGDEATGVAVVRRAVVEPLRWIAENAGLEGYVITAKVAELDKGHGFNA
ATGEYVDLVKAGVIDPVKVTRSALENAASIAALLLTTETLVVEKPAEEEADAGHGGHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggcgtcacgatcgcccgcgaggtcgag
ctcgacgacccgtacgagaacctcggcgcccagctcgtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgc
gagggcctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgccgtcgccgccgtctccaaggagctgctggacacggcccgcccgatcgacgacaag
tccgacatcgccgccgtggccgggctctccgcccaggactcgcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctggagttcaccgagggcatggccttcgacaagggctacctctcgccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatcggctccatccaggacctgctcccgctgctggagaaggtcatccag
gcgggcggctcccggccgctgctgatcatcgccgaggacgtcgagggcgaggcgctctcc
accctcgtcgtcaacaagatccgcggcacgttcaacgccgtcgccgtgaaggctcccggc
ttcggtgaccgccgcaaggccatgctcggcgacatcgccaccctcacgggcgcgaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctcgacgtactgggctccgcc
cgccgcgtcaccgtctccaaggacgacacgacgatcgtcgacggcggtggcgacagcacc
gaggtcgcgggccgcgtcaaccagatcaaggccgagatcgagtccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtg
cacgccgccaaggtgctggaggacggcctgggcaagacgggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgtggtcgagccgctgcgctggatcgccgagaacgccggtctc
gagggctacgtcatcaccgcgaaggtcgccgaactcgacaagggccacggcttcaacgcc
gcgaccggcgagtacgtcgacctggtgaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgcgctggagaacgccgcttccatcgccgcgctgctcctcacgaccgagaccctg
gtcgtcgagaagccggccgaggaagaggccgacgccggtcacggtggccacggccacagc
cactga
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