Streptomyces niveus: BBN63_13085
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Entry
BBN63_13085 CDS
T04887
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
snw
Streptomyces niveus
Pathway
snw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBN63_13085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snw03021
]
BBN63_13085
03400 DNA repair and recombination proteins [BR:
snw03400
]
BBN63_13085
Enzymes [BR:
snw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBN63_13085
Transcription machinery [BR:
snw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBN63_13085
DNA repair and recombination proteins [BR:
snw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBN63_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AQU67034
UniProt:
A0A1U9QRZ2
LinkDB
All DBs
Position
complement(3078404..3082309)
Genome browser
AA seq
1301 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQVENRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLNEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVIGE
GRFFGSSAEATMAFDNRELSLQAKIDIRFPVGTIPPRGWTPPVGEDGDTNAEWQQGDPFR
LRTTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFFW
ATRSGVTVAISDIVVPDAKKAIVQGYEAQDERVQKQYERGLITKEERTQELIAIWTKATN
EVAEAMNANFPKTNPVSMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREG
LSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLRIAE
RGADGVLRKAEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDAVVAAGVEEVKTRS
VLTCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDD
ITQGLPRVVELFEARTPKGVAPISEAAGSVRIEETEKTKKLVVTPDDGSEETPFPISKRA
RLLVGDGDRVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIE
IIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASL
ATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPT
EEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctcgccaccgcggacgacatc
cggacctggtcccacggcgaagtgaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaagtcacacgcgccaaggtgcgccgtgagcggatgggccacatcgagcttgccgctccc
gtcacccacatctggtacttcaagggcgttccgtcccggctggggtacctgctcgacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgccgtacgcgcgacctgccctcgctggaggcgcacgtctccgtcgagcgtcag
caggtcgagaaccgtcgcgactccgacctcgaagcccgcgccaagaagctcgagaccgac
ctggccgagcttgaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgaaggc
gccgagcgtgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgtctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggcgcagcggcg
ctccagaagcgcctggagtccttcgacctgaacgaagaggccgagcggctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctggactgcgtgccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgtctccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgcccggtcaccggtcccggcaaccggcccctgaag
tccctcagcgacatgctgaagggcaagcagggccgtttccgccagaacctgctcggcaag
cgagtcgactactcggcccgttccgtgatcgtcgtcggaccgcagctcaagctgcaccag
tgcggtctgccgaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctccgaccctgcaccgcctcggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtcccgtcaccatgcccacccaggac
atggtgctcggcctcttcttcctcaccacggacgaggaggagcgcgaggtcatcggcgag
ggccggttcttcggctccagcgccgaggccacgatggcgttcgacaaccgggagctctcg
ctccaggcgaagatcgacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggtcggcgaggacggcgataccaacgccgagtggcagcagggcgacccgttccgg
ctgcgtacgaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttc
gtcgactactcggtgggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgc
taccccaaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttcttctgg
gcgacccgctccggtgtgaccgtcgcgatctccgacatcgtcgttcctgacgcgaagaag
gcgatcgtccagggttacgaggcgcaggacgagagggtccagaagcagtacgagcgcggt
ctgatcaccaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaac
gaggtcgccgaggcgatgaacgcgaacttcccgaagaccaaccccgtctccatgatggtc
aactcgggtgctcgcggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctg
gtgtccaacgccaagaacgagacgattccccgtcccatcaaggcgtccttccgtgaaggc
ctgtccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctggccgacacc
gccctgcgtaccgccgactcgggttacctcacccgtcgtctggtggacgtctcgcaggac
gtcatcatccgcgaggaggactgcggcaccgaccgcggcctcaagctgcggatcgccgag
cgcggcgccgacggtgtcctgcgcaaggcggaggacgtcgagacgtccgtatacgcgcgg
atgctcgccgaggacgtcgtcgtggacggcaaggtcatcgcgccggccaacgtcgacctg
ggcgatgtcctgatcgacgcggtcgtggcggccggcgtggaggaggtcaagacccgctcg
gtcctgacctgtgagtccgcggtcggcacctgtgccttctgctacggacgttcgctggcc
accggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggt
gagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtggcgggtgacgac
atcacgcagggtctgccgcgtgtcgtcgagctcttcgaggcccgtacgcccaagggtgtc
gcgccgatctccgaggccgcgggctccgtccgcatcgaggagaccgagaagacgaagaag
ctcgtcgtcaccccggacgacggaagcgaggagacgccgttcccgatctccaagcgcgcc
cgtctgctcgtgggcgacggtgaccgcgtcgaggtgggccagaagctcaccgtgggtgcc
accaacccgcacgacgtgctgcggatcctcggtcagcgcgcggtccaggtccacctggtc
ggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgag
atcatcatccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggaactg
ctgccgggcgagctcgtcgagcgctcgaagttcgagacggagaaccgtcgtgtggtcacg
gaaggcggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcctcgctg
gccaccgagtcgtggctgtcggcggcgtccttccaggagacgaccagggtcctgaccgac
gcggcgatcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcgga
aagctcatcccggcgggtacgggtctctcccgctaccgcaacatccgggtggagccgacc
gaggaggccaaggccgcgatgtactcggcagtgggctacgacgacatcgactactcaccg
ttcggcacgggctccggccaggccgttccgctggaggactacgactacggtccgtacaac
cagtaa
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integrated database retrieval system
