Streptomyces niveus: BBN63_17515
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Entry
BBN63_17515 CDS
T04887
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
snw
Streptomyces niveus
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snw03021
]
BBN63_17515
Transcription machinery [BR:
snw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBN63_17515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
NirdL-like_HTH
HTH_Crp_2
HTH_11
MarR
HTH_3
DUF134
HTH_37
DUF7343
DUF4423
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AQU67771
UniProt:
A0A1U9QVC2
LinkDB
All DBs
Position
complement(4085904..4086824)
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AA seq
306 aa
AA seq
DB search
MPPQSEPRAEPQAESRPESRSEVPLTEPPGPTEQPSLVETPSDTEPRPSTPQTRGADTRA
LTQLLFSQIKDLERGSPEHTRVRSALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLI
NAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVTGATEDLTTA
HGRSPTTAEIAERLKISEEEVLACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALA
GVEHRDLVRHLLVQLPEREQRILMLRYYNNLTQSQISQELGVSQMHVSRLLARSFARLRS
ANRIEA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccagagcgaaccccgagccgagccccaggccgagagcaggcccgagagcagg
tccgaggtccccctcaccgagccccccggccccaccgagcagccaagcctcgtcgagacc
ccgagcgataccgagccaagaccttcgacaccgcagacgcggggcgccgacaccagggcg
ctgacacagctcctcttctcccagatcaaggatctggaacgcggcagcccggagcacacc
cgggtccgcagcgcgctcatcgaggcgaatctgccgctcgtgcggtacgccgccgcccgc
ttccgcagccgtaacgagcctatggaggacgtcgtccaggtcggcacgatcggtctgatc
aacgcgatcgaccggttcgacccggaccgcggcgtacagttcccgaccttcgcgatgccc
accgtcgtcggcgagatcaaacgctacttccgcgacaacgtgcgcaccgtccacgtaccg
cgccggctgcacgagctgtgggtccaggtcaccggcgccaccgaggacctgacgacggct
cacggccgttcgcccaccaccgccgagatcgccgagcggctgaagatctccgaggaggag
gtcctcgcctgcatcgaggcgggccggtcgtaccacgcgacgtcgctggaggccgcccag
gagggcgacggactgcccggcctgctcgaccggctcggctacgaggacccggcgctggcc
ggtgtcgagcaccgcgatctggtccggcatctgctcgtacaactgccggagcgggaacag
cgcatcctgatgctgcgctactacaacaacctgacgcagtcacagatcagccaggaactc
ggcgtctcccagatgcatgtgtcaaggctcctggcgcgaagcttcgcgcgtttgcgatcc
gcaaacaggatcgaggcgtag
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