Streptomyces niveus: BBN63_26020
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Entry
BBN63_26020 CDS
T04887
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
snw
Streptomyces niveus
Pathway
snw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBN63_26020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snw03400
]
BBN63_26020
Enzymes [BR:
snw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BBN63_26020
DNA repair and recombination proteins [BR:
snw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBN63_26020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AQU69120
UniProt:
A0A1U9QY34
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All DBs
Position
complement(6063009..6063881)
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AA seq
290 aa
AA seq
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MTLPDRPRNPVGGHVPVAGGLARVGLAWARDIGAETVQVFVANPRGWATPDGNPAQDEQF
REQCAAEGLSVYIHAPYLINFGSHTPETARKSVHSLRHSLRRGREIGAPGVVVHTGSATG
GRPREVALAQVRELMRPLLDELTHDDDPYLLLESTAGQGSSLCSLAEDFGPYFDALDAHP
KLGICLDTCHIFAAGHDLAAPHGTHRTLDRLVETVGPGRLGLIHANDSKDVSGARKDRHA
NIGAGHIGEAPFRALFSHPATEGVPLVIETPGGKEGHAADVALLKKLRDA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgacgctccccgaccgcccgcgcaatcccgtcggcggccatgttccggtggcgggcggt
ctcgcccgcgtggggctggcctgggcgcgtgacatcggcgccgagaccgtccaggtcttc
gtggccaatccacgcggctgggcgacgcccgacggcaatccggcgcaggacgagcagttc
cgggaacagtgcgccgccgagggcctgtccgtgtacatccacgcgccgtatctgatcaac
ttcggctcccacacgccggagacggctcggaagtcggtgcactccctgcggcacagcctg
cgccggggccgggagatcggcgcgcccggcgtcgtcgtgcacaccggctcggcgaccggc
ggacggccgcgcgaggtggcgctggcgcaggtacgggagctgatgcggccgctcctcgac
gagctgacgcacgacgacgacccgtatctgctgctggagtcgaccgcggggcagggctcc
tcgctctgctcgctcgccgaggacttcggtccgtacttcgacgcgctcgacgcgcacccc
aagctcggcatctgcctcgacacgtgccacatcttcgcggcgggccacgatctggccgcg
ccgcacgggacgcaccggacgctggaccggctggtggagacggtgggtcccggccggctc
gggctgatccacgccaacgactccaaggacgtgtcgggcgcccgtaaggaccggcacgcg
aacatcggcgcgggccatatcggtgaggcgccgttccgggcgctgttctcgcatccggcg
accgagggcgtgccgctggtgatcgagacccccggcggcaaggagggccacgcggcggac
gtggccctgctgaagaaactccgcgacgcctga
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