Streptomyces niveus: BBN63_29420
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Entry
BBN63_29420 CDS
T04887
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
snw
Streptomyces niveus
Brite
KEGG Orthology (KO) [BR:
snw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snw03021
]
BBN63_29420
Transcription machinery [BR:
snw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBN63_29420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
DUF7343
MarR_2
HTH_3
HTH_AraC
HTH_31
MarR
Lambda_CIII
Motif
Other DBs
NCBI-ProteinID:
AQU69700
UniProt:
A0A1U9QZT4
LinkDB
All DBs
Position
6849062..6849934
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AA seq
290 aa
AA seq
DB search
MSMASTVPTESTQYGTHQADMAELGLPYVECPGDVAPKDAREISRIFFVRLAELEEGTHE
HQYVRNTLIELNLALVRYAATRFRNRSDQMEDIVQVGTIGLIKAIDRFELSREVEFATFA
VPYIVGEIKRFFRDTSWAVHVPRRLQELRIDLAKATDELSQRLDRAPTTAELAEYLNLDE
NEVIEGVVASNGYTAGSIDMPTDDTAESSSKLSDRLGAPDAQLEAAENVQALKPLIDELD
EREKWILQMRFGAEMTQSEIGQELGVSQMHVSRLLSRITGRLREGLLAVE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgtccatggcgagcacagtcccgaccgagagcacgcagtacggaacccaccaggccgac
atggcggaactgggacttccgtacgtggaatgcccgggggacgtggcacccaaggacgcg
cgggagatttcgcggatcttcttcgtccggctggcagagctggaggaaggcacccacgag
caccagtacgtccgcaacaccctgatcgagctcaacctggccctggtgcggtacgcggcg
acgcgcttccgtaaccgctcggaccagatggaggacatcgtccaggtcggcaccatcggc
ctcatcaaggcgatcgaccgcttcgagctcagccgtgaggtggagttcgcgacgttcgcc
gtcccgtacatcgtcggtgagatcaagcggttcttccgtgacacgagctgggccgtgcat
gtaccgcgccggctccaggagttgcggatcgacctggccaaggcgacggacgaactgtcg
cagcggctggaccgcgccccgacgacggccgaactcgccgaatacctgaacctcgacgag
aacgaggtcatcgaaggcgtcgtcgcgagcaacggctacaccgccggctcgatcgacatg
ccgaccgacgacaccgccgaatcgtcctccaagctctccgaccgactcggcgcgcccgac
gcgcagttggaggcggcggagaacgtgcaggcgctcaagccgctgatcgacgagctggac
gagcgcgagaagtggatcctccagatgcgcttcggcgcggagatgacgcagtcggagatc
gggcaggagctgggcgtctcccagatgcatgtgtcgcgactgctgtcccggatcaccgga
cggctgcgggagggtctgctcgccgtcgagtga
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