Candidatus Schneideria nysicola: KEC38_00750
Help
Entry
KEC38_00750 CDS
T07486
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sny
Candidatus Schneideria nysicola
Brite
KEGG Orthology (KO) [BR:
sny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sny03032
]
KEC38_00750 (gyrB)
03400 DNA repair and recombination proteins [BR:
sny03400
]
KEC38_00750 (gyrB)
Enzymes [BR:
sny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KEC38_00750 (gyrB)
DNA replication proteins [BR:
sny03032
]
Prokaryotic type
DNA Topoisomerases
KEC38_00750 (gyrB)
DNA repair and recombination proteins [BR:
sny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KEC38_00750 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UAJ66198
LinkDB
All DBs
Position
148341..150755
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVLDNAIDEALSGYCKNID
IIIYDDQSISIQDDGRGIPTDIHEEGISAAEVIMTVLHAGGKFDEISYKVSGGLHGVGIS
VVNALSQKLELIIKRQGKIYRQLYNTGVPQTTLEIIGETNQTGTYIRFWPNPLIFQNNIK
FKYDILVKRIRELAFLNPGLSISIQDNRINIHHSFQEDGGIKAFVAFLSKNKIPIHPNIF
YFAAEKDKISVEIALHWTNTFQNHIYCFTNNIPQHDGGTHLSGFRSAITRTINTYIDREG
YNKKSKVNIIGDDTREGIVAIVSIKAHNPKFSSQTKDKLVSSEIKSAVETLMNEYLIQYL
LEHPQDAKSIVGKIISAARTREAARKVREINRKKGTLDLSILSGKLADCQEKNPILNELY
LVEGDSAGGSAKQGRNRKNQAILPLKGKILNIEKARFDKILSSQEVSTLVTALGCGMGPD
DYDPNKLRYHHIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHIFIAQPPLYKIKRGK
KEQYIKDDESMEQFQITLATDGTILHTPSIKLSGIVLKNLILEYRSTKKIINRIERHFPK
EILQSLMYQPFLNEKDLNDSNIIFNWMTSFIKNLNSSNNQRFGITYSFELQENYERKLFE
PLIQIKTYCTKNYYLLDSNFFTSKEYKTIARIGNKLNKLFETDTTYIERNGNTKFIKNFD
ETFIWLMEEVRREIVIQRYKGLGEMNPDQLWETTMDPQQRSILRITIKDAIYADKLFTTL
MGDEVGPRRIFIEENALKAMNIDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcttatgattcttcaaatattaaagtacttaaaggactagatgctgttcgt
aaacgtcctggtatgtacattggggatactgatgatggaacgggattacatcatatggta
ttcgaagtgttagataatgccattgatgaggctttatcgggttattgtaaaaatattgat
attattatatatgatgatcaatccatatcaatccaagatgatggtcgtggtattcctacc
gatatccatgaagagggtatttcagctgctgaagtgattatgacggtactacacgctggt
ggaaaatttgatgaaatttcctataaagtatctggaggattacatggagttggaatttct
gttgttaatgctttatcccaaaaattagaattaatcattaaaagacaaggtaaaatatat
cgtcaattatataatacaggcgttcctcaaactacactagagattattggtgaaactaac
caaacaggaacttatataagattttggcctaatccacttatttttcaaaataatattaaa
tttaaatacgatatcttagtaaaaagaatacgcgaattagcttttttaaatccaggtcta
tctatttccattcaagacaatcgtataaatatccatcattcttttcaagaagatggaggt
attaaagcatttgtagcttttttaagtaaaaataaaattcctattcatcctaatatattt
tattttgctgctgaaaaagataaaattagtgtagaaatagcacttcattggactaacact
tttcaaaaccatatttattgttttacaaataatattcctcaacatgatggaggcactcat
ttatctggttttcgttctgctattactagaacaataaatacttatatagatagggaagga
tataataaaaaatctaaggttaatattattggtgatgatacacgcgaaggtattgttgct
attgtctctattaaagcacataatcctaaattttcctcacaaactaaggataaacttgtt
tcttctgagataaaatctgctgttgaaacattaatgaatgaatatctcattcaatattta
cttgaacatcctcaggatgctaaatcaatagtaggaaaaataatttctgcagcccgaact
cgtgaagcagctcgtaaagtacgagaaatcaatcgtaaaaaaggaacattagatctatct
attttgtccgggaaattagctgattgtcaagaaaaaaatcccatattaaatgaactttat
ttagttgaaggtgattcggctgggggttcagctaaacaaggacgtaatagaaaaaatcaa
gctattttacctttaaaaggaaaaattcttaacatagaaaaagcacgttttgataaaatt
ctttcttctcaagaagtatcaacgcttgttacagcattaggttgtggtatgggtccagat
gattatgatcctaataaactacgttatcatcatataattattatgaccgatgctgatgta
gatggatcacatattcgtactttattattaacttttttttatcgtcaaatgcctgaaatt
atagaacgcggtcatatttttattgctcaaccacctttatataaaataaaaagaggaaaa
aaagaacagtatattaaagatgatgaatctatggaacaatttcaaattacattagcaaca
gatggaactatattacatactccttcaataaaattatccggtattgttttaaaaaattta
attttagaatatagatctacaaaaaaaatcattaatcgtattgaaagacattttcctaaa
gaaatattacaatctctaatgtatcaaccttttttaaatgaaaaagatctaaatgattct
aatatcatttttaattggatgacatcctttataaaaaatttaaatagtagtaacaatcaa
cgttttggaattacatatagttttgaattacaagaaaactatgaaagaaaattatttgaa
cctcttatacagataaagacttactgtacaaaaaattactatttattagatagtaatttt
tttactagtaaagaatataaaacaatagcaaggataggaaataaattaaataagctattt
gaaacagatactacatatattgagagaaatggaaatacaaaatttattaaaaattttgat
gaaacctttatttggttaatggaggaagttcgtagagaaattgtaattcaacgttataaa
ggtttaggagaaatgaatcctgatcagctttgggaaacaactatggatccccaacaaagg
tctatattacgtataacaataaaagatgctatctatgctgataaactttttactacttta
atgggtgatgaagtaggtcctcggcgtatatttatagaggaaaatgctcttaaagcgatg
aatatcgatgtttag
DBGET
integrated database retrieval system
