Candidatus Schneideria nysicola: KEC38_01830
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Entry
KEC38_01830 CDS
T07486
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sny
Candidatus Schneideria nysicola
Brite
KEGG Orthology (KO) [BR:
sny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sny03016
]
KEC38_01830 (truB)
Enzymes [BR:
sny01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KEC38_01830 (truB)
Transfer RNA biogenesis [BR:
sny03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KEC38_01830 (truB)
Prokaryotic type
KEC38_01830 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UAJ65894
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All DBs
Position
complement(367107..367892)
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AA seq
261 aa
AA seq
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MNNTVDIVKKYLNFRRDVNGILLLNKPKGISSNGFLQKLKIIFCAKKAGYIGTLDPLATG
MLPICFGKANKFVSYLTNADKRYRVKAFLGQSTNTFDAEGKITSIKPVIFNKNNLEDVLN
LFRGEMDQIPPMFSALKYKGIPLYKYANKGINIYRQPRKISIYSLKLINWSANKLELEIH
CSKGTYIRVIINDIGEKLGCGAYVQSLHRLSVAHFSEESMIQFDEIKRIVSENISLLESK
TIFSKIDQLLLPYEQLRRNIL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaataatactgtagatattgtaaaaaaatacttaaattttcgtcgtgatgtcaatggt
attcttctattaaataaaccgaagggaatttcatccaatggatttcttcaaaaattaaaa
ataatattttgtgctaaaaaagcgggttatataggaacactagatccattagctacgggt
atgttacctatttgctttggaaaagccaataaatttgtatcatacttaactaatgcagat
aaaagatatcgggtgaaagcttttcttggacagagtacgaatacatttgatgcagaaggg
aaaattactagtataaaaccagtaatatttaataaaaataatctagaagatgtattaaat
ttatttagaggtgaaatggatcaaataccaccaatgttttctgctttaaaatataaaggg
attcctttatataaatatgctaataaaggtatcaatatataccgtcaacctagaaaaatt
tctatttatagtttgaaattgatcaattggagtgcaaataaacttgaattagaaatacat
tgttcaaaagggacatatatacgtgttatcataaacgatattggtgaaaagttaggttgt
ggtgcctacgtacaatctttgcatcgtttatcagtcgcacatttttcagaagaaagtatg
atacaatttgatgagattaaaagaattgtttcggaaaatatttctctcttagaaagtaaa
acaatattttctaaaatcgatcaattattacttccatacgaacaattgagaagaaatata
ttatga
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