Candidatus Schneideria nysicola: KEC38_01965
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Entry
KEC38_01965 CDS
T07486
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sny
Candidatus Schneideria nysicola
Pathway
sny03030
DNA replication
sny03430
Mismatch repair
sny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KEC38_01965 (holA)
03430 Mismatch repair
KEC38_01965 (holA)
03440 Homologous recombination
KEC38_01965 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sny03032
]
KEC38_01965 (holA)
03400 DNA repair and recombination proteins [BR:
sny03400
]
KEC38_01965 (holA)
Enzymes [BR:
sny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KEC38_01965 (holA)
DNA replication proteins [BR:
sny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KEC38_01965 (holA)
DNA repair and recombination proteins [BR:
sny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KEC38_01965 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UAJ65917
LinkDB
All DBs
Position
complement(391553..392572)
Genome browser
AA seq
339 aa
AA seq
DB search
MTIGRMINLTSEKLVYQLQNFLASFYILIGNDILLIEESKNLILKQSHSLKFYKHENIFL
YESIDWNRLFHSINNLNLFTNRQSLIIHFGTQNIISSIDENLKKLISLSHNDLLCIFILH
QKPSNHTWFKLLNSNNTTVLVNCNTPKKEKLYHWILNRAKNLNLSLDENACQLLSYYCEN
NLIAIVQILENLLLIYPDKKQFSTKHLKIVINDYSQFTHFKWVDAVLSGEENRASYILHH
LKLSGIEPILLLRLIQKEILFLLKLKRYTINIPIHKLFYKYNIWYDRRLLLKNALDRLDI
QQLKKSIQFMEIIELQYKNNENYFIWFHLHTLIILLSKR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgataggaagaatgattaacttaacgtcagaaaaacttgtttatcaattacagaat
tttttggcttcattttatatcttaatcggcaacgatattttattaatagaagaaagtaaa
aatcttatattaaaacaatctcattcattaaaattttataaacatgaaaatatattttta
tatgaatctatagattggaatagattattccattctattaataatttaaatttatttacc
aatcgtcaatcattaatcatacattttggaacccaaaatataatttcttctatagatgaa
aatttaaaaaagttaatatcattatcacataatgatctattatgtatttttatacttcac
caaaaaccttctaatcatacttggtttaaattattaaattctaataacactacagtattg
gtcaattgtaatacaccaaaaaaagaaaaattatatcattggatattaaatcgtgccaaa
aatttaaatttatccttagatgaaaacgcctgtcaactgttatcttactattgtgaaaat
aatttaattgctatagtacaaattttagaaaatttactattaatttatccagataaaaaa
caattctctacgaaacatttaaaaatagtaataaatgattactcacagttcactcatttt
aaatgggttgacgcagttttatctggagaagagaatcgtgctagttatattctacatcat
ctaaaattatcaggtattgaaccaattcttttgttacgtttaattcaaaaagaaatattg
ttcctattaaaattaaaaagatataccataaacataccgattcataaattattctataaa
tacaatatatggtatgatcgtcgtcttttattaaagaatgcactagatagattagatatt
caacaattaaaaaaatctattcaatttatggaaataatagaattacaatataaaaataat
gagaactattttatttggtttcatttacatacactaataattctcttatctaagagataa
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