Candidatus Schneideria nysicola: KEC38_02530
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Entry
KEC38_02530 CDS
T07486
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sny
Candidatus Schneideria nysicola
Pathway
sny03030
DNA replication
sny03430
Mismatch repair
sny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KEC38_02530 (dnaQ)
03430 Mismatch repair
KEC38_02530 (dnaQ)
03440 Homologous recombination
KEC38_02530 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sny03032
]
KEC38_02530 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sny03400
]
KEC38_02530 (dnaQ)
Enzymes [BR:
sny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KEC38_02530 (dnaQ)
DNA replication proteins [BR:
sny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KEC38_02530 (dnaQ)
DNA repair and recombination proteins [BR:
sny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KEC38_02530 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
VPS53_C
Motif
Other DBs
NCBI-ProteinID:
UAJ66357
LinkDB
All DBs
Position
487681..488418
Genome browser
AA seq
245 aa
AA seq
DB search
MKNNTTRQVVLDTETTGINKFGLPYEGHRIIEIGAVEIVNRELTGQFFHTYLKPDRPIDP
EAFNIHGISDNFLSNKPHFSQIADNFFSFIYGSELIVHNASFDIGFIDQEFFLLKRNIAK
VNTFCKVIDSLKLARKIFPGKRNNLDALCDRYLIDNKKRSLHGALIDAKILANVFLHMTG
GQTSLNFLLNEKEAQSLQKRKKIRRQEKTALKIIYASVDEETMHKRYLDMIQYNNKVCIW
KRRQQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataatactacaagacaagttgttttagatactgaaactactggtataaataaa
ttcggtcttccctatgaaggtcatagaattattgagataggtgcagtggagatagtgaat
cgtgaattaaccggtcaattttttcatacttatctgaaacccgatagaccgattgatcct
gaagcttttaatatacatggtattagcgataattttttatcaaataaaccgcatttttct
caaatcgcggataattttttttctttcatatatggaagtgaactaattgttcacaatgcc
tcttttgatattgggttcatagatcaagagttttttttactcaaaagaaatattgcaaaa
gttaatactttttgtaaagtaatagatagtttaaaattagcacgtaaaatttttccagga
aaaagaaataatttagatgcattatgtgatcgttatttaattgataataaaaagcgctct
ttgcatggagcgctaatcgatgctaaaattttagctaatgtttttttacatatgactggc
gggcaaacttctctgaattttctcttaaacgagaaggaagcccaatctttacaaaaaagg
aaaaagatacgacgtcaagaaaaaacggcattaaaaattatctatgcatctgtagatgaa
gaaacaatgcataaacggtatctggatatgatccaatataacaataaagtatgtatatgg
aaaagaagacagcaatag
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