Streptomyces nigra: DC008_01100
Help
Entry
DC008_01100 CDS
T05839
Name
(GenBank) hypothetical protein
Organism
snz
Streptomyces nigra
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_92
Glyco_hydro_92N
CBM_6
fn3
CBM_35_2
PAP2
FIVAR
Iron_traffic
Motif
Other DBs
NCBI-ProteinID:
AWE48445
LinkDB
All DBs
Position
231601..238704
Genome browser
AA seq
2367 aa
AA seq
DB search
MRAIRLLTDNVVACRTAGSLHACTPRRRRDNVPVRSVRSHHPLPRVVPPGAARRRRRPLR
AAVAALLAGALGIGVLTGGGAAAAVPVAGASAGSSGMSGGTDYAQLVDPFVSTAGDDGND
LPGAQSPHGLAKVNPLTTPKRNHTGYDYNEDHIAGFTATNLDGVGGSGGGGDLLVVPTSV
QYDKRPAPSTYAHPFSHKDETATPGHYQVGLGSVSGTASAVTQDSGTIDAEMTTTTRTAL
ERYRFPAGSKPKLVLDLANNYTSRTRSTLKATTLADGTTAIGGLIAGSFNGAAYQLYYHA
TTNVPVTSLKTWGKDGTLSAATAQDGTDTGAVLAFDPSDGDDIELRITLSPISAEQATTD
QRDEVDGRTFDEVRAAAKAEWNAALGAVDVRASAKSDPGSTLTKQFYTHLYRMYALPVNA
TSTSGTYRGADGAVHKANGFTYYDGWSTWDDFRKYSVEAYIDPAAYRDMIQSLIVLFADQ
RASGKSLSSLTHSVPTVRWERSAVLVADALSKGFKDFDRLDEAYPALLAYSGYYTGAQLR
QGYVAGDPGTTVQRGYDQWALSVIADALGKKDDAKKLRAQATMAIDNLVKPGAWTAGDGT
KVGLLTPRAANGDWQGADYEKFEAAGLYQGTLWQYHWYDAYDMDGLIEAMGGAEAGKAAI
RHMFGEDSTVDDGSTMLHSNANEIDLQAPYLFNYVGEPSLTQKWVRAIYTSATWNRYIAT
GSTNEAPSSGGEFRPPVKTQVYKLAPDGFLPTMDNDAGTMSTMFVAAALGLFPVTAGSSQ
FQIGSPFFDSTKITYGNGASFTVKADGVSPSNYYIQNATLDGKRFGNTWLDYSQIVSGGT
LAFSMGSKPSQWGARTEPAYSLSTDSGDSDSGSEKGRTLVSARPGIVDTAADGTVDGSVR
LTLDGPASFAARKGTSLTKTGAASVSGLPKGVTADLRVTGKKTATLALTGTTEVDARFGI
TFRDAAFAHGVPASSVSGTGTSPTDPLRVSAAAVHRKALDALVDQASLVRGGNYSDGSWT
VFRAALERARTVLADRASAAGTLMAAYDALRSAIDALTLDEGGYAVLQAESPDEKEGPSL
TSERNNSDGNLGGVTEGSWERFTKLDFGGVAPRSVSVRYANSQATNAKPSSVDVHAGTAD
GPVVATVSLPGTGGWQYWSTVQAAITDPEALLAAKSATFVFHAPPGQQWVANFDWHQFSP
YELSTSPTTSLATLTAVNSTATGDGSLPLKLGNGIFENVTNGAWAQWKDIALRNGADTVT
VRYDKPQSRAASDSHIELRLGSKDGEKHVDIPLDYTGSGWGTIATTSVHLDPSVFAGVQD
VYAVFVSGTHSDAQPYVGNVYSLTVTQNADTPVGFDATAFRSHSGGGLKSEPVGWTGSGS
TTNLGGTYDGAWLDYGTIDFGSSPKNTVTISYVNNSARCGTNSAVELYLGSFDAANPRTP
YATVPLPVTGSAWSAGGTTSLTLPEAITGEHAVHLRLVTTPDASHPYVANLARFTFAHVE
EPAETDRSALRKAIERFEGLSDDAERYGTIDFGVFLRELAAARALVDAEDATQLEADAHT
RSLTLAANQLVPLPRLKLEDLVATASAVVDDRYTDASWTAFTTALAEAKTAIAADKATDE
TLNARYEALRNAMSALKAKPKTVPAAPDAVSATSSGSSLTVAWAAPEDTGGSRVVAYKVT
LNDGHEVRIDDPDSRSTTFTWLRPGRTYTARVQAVNAYGASRPSAATAPVVIGGGTPQKP
GVTSVTTDGTQVRVTWQAAGDGGFPVIGYTVALGDGTTAHVSPTADTALLTAKNRGKAHT
ATVTAVTLAGTSDERPEATPVTTGSAAATAAPAYEPSPFPDDVLDATYASDKWPGTDGGT
GYFQGLLNGFKDLGSGVLAADTKVPGGTPLTAENDKIAVRINNAATQKGVDRAVVDAANS
STITMADGLGSRLGPLYLDALKGGRLPKTSALFSRVTKGLDLGGAAKDHYGYQRPYVRLG
FVGDGGAIYESQDRSYGGLTTSGSYPSGHTYGGYEAGTILATLLPELAPSILARASEYGD
NRIVLGFHYPLDVMGGRIAAQATVAHRWADPDFAELLTQAHTEMRNVLLAQCEREGYGDT
LEACAGEPYAGLSTAQQVDLYTQRLDYGFSKVGKSGQALEAPADAAALLTTAFPNLSTEQ
RTQILEQTATDSGRPLDLTSSGGASWERINLAAALSARVVVNADGSVKVTNYSDATKAAD
ADVAAIKVGGVAVDGFDPAVSTYVVDWPRGRRIPAVSAVPAQSGARVKVSEGSAVLSSDG
HRFSTRTIKVTSADGSVTRTYTVGFQLTDRDERPVAAGGNGGDRAGGASGVVRGGDAGAG
SGGGGGLWSPAAEWADPLRIAWGRGAY
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgatcaggttgctgactgacaacgttgtcgcatgtcgcaccgcggggtcgctc
cacgcgtgcacaccgcgacgcaggagagacaacgtgcccgtcagatccgtcagatctcat
caccccttgccccgcgtggttccgcccggagccgcccgtcgccgtcgcaggccgctgcgc
gccgcggtggccgcgctgctcgccggcgcgctggggatcggcgtactgacgggtggcggc
gctgccgccgcggtgcccgtcgcgggcgcctccgccgggtcctcggggatgtccggcggc
accgactacgcccagctcgtcgacccgttcgtgtcgaccgccggtgacgacggcaacgac
ctgccgggcgcccagtcgccccacggtctggccaaggtcaatccgctgacgacgccgaag
cgcaaccacaccgggtacgactacaacgaggaccacatcgccgggttcacggcgacgaac
ctcgacggtgtcggtggttccggcggcggtggtgacctgctcgtcgtcccgacctcggtg
cagtacgacaagcggcccgcccccagcacgtacgcgcacccgttcagccacaaggacgag
acggcgacacccggtcactaccaggtgggcctcgggtccgtctccggtaccgcctcggcg
gtcacgcaggactccggcaccatcgacgccgagatgaccacgacgacgcgcaccgcgctc
gagcggtaccgcttccccgccgggtcgaagccgaagctcgtcctcgacctcgccaacaac
tacaccagccgcacccgttcgaccctcaaggcgacgacgctggccgacgggaccaccgcg
atcggcgggctcatcgcagggtcgttcaacggtgccgcgtaccagctgtactaccacgcc
accacgaacgtccccgtgacctccctgaagacctggggcaaggacggcacgctgagcgcc
gcgaccgcgcaggacggcacggacaccggtgccgtgctcgccttcgacccgtccgacggc
gacgacatcgaactgcgtatcaccctgtcgccgatcagcgccgagcaggccacgaccgac
cagcgcgacgaggtggacggccgcaccttcgacgaggtgcgcgcggccgcgaaggcggag
tggaacgccgcgctcggcgccgtcgacgtacgggcctcggcgaagtccgaccccgggtcg
acgctcaccaagcagttctacacgcacctgtaccgcatgtacgcgctgcccgtgaacgcc
accagcaccagcggtacgtaccgcggcgcggacggagcggtgcacaaggcgaacggcttc
acgtactacgacggctggtccacctgggacgacttccgcaagtactccgtcgaggcgtac
atcgacccggccgcctaccgggacatgatccagtcgctgatcgtgctcttcgccgaccag
cgcgcctccggcaagagcctgagcagcctgacccattcggtgccgaccgtgcgctgggag
cgttcggcggtgctggtcgcggacgcgctgtcgaaggggttcaaggacttcgaccggctc
gacgaggcgtacccggcgctgctggcgtactccggctactacacgggtgcgcagctgcgg
cagggatacgtcgccggtgaccccggtacgaccgtgcagcgcggctacgaccagtgggcg
ctgtccgtcatcgccgacgcgctcggcaagaaggacgacgcgaagaagctgcgcgcgcag
gcgaccatggcgatcgacaacctcgtgaagcccggggcgtggaccgcgggtgacgggacg
aaggtcggtctgctcaccccgcgcgccgcgaacggcgactggcagggcgccgactacgag
aagttcgaggcggccggtctctaccagggcacgctgtggcagtaccactggtacgacgcc
tacgacatggacggtctcatcgaagccatgggcggcgcggaggccggcaaggccgcgatc
cggcacatgttcggcgaggactccaccgtcgacgacggctcgaccatgctgcactccaac
gccaacgagatcgacctgcaggccccctacctcttcaactacgtcggcgagccgagcctg
acgcagaagtgggtccgggccatctacacgagcgccacctggaaccggtacatcgcgacc
ggctccacgaacgaagcgcccagctccggcggcgagttccgcccgccggtcaagacgcag
gtctacaagctggccccggacggcttcctgccgaccatggacaacgacgcaggcaccatg
tcgaccatgttcgtcgcggccgccctgggtctgttccccgtgaccgcgggctccagccag
ttccagatcggcagcccgttcttcgactccacgaagatcacctatggcaacggtgcctcg
ttcaccgtgaaggccgacggggtgtcgccgagcaactactacatccagaacgcgaccctc
gacggcaagcggttcggcaacacctggctcgactactcgcagatcgtctccggtgggacg
ctcgcgttctccatgggttccaagccctcccagtggggcgcccgcaccgagcccgcgtac
tcgctgagcaccgactccggtgacagtgactcgggttcggagaagggcaggaccctcgtg
tccgcccggccgggcatcgtcgacacggccgcggacggcaccgtcgacggcagcgtgcgg
ctcaccctggatggaccggcgtcgttcgccgcccgcaagggcaccagtctcaccaagacc
ggcgcggcgagtgtgtccggactgccgaagggcgtgacggcggacctccgtgtcaccggc
aagaagacggccacgctggccctcaccggcaccaccgaggtcgacgcacgcttcggcatc
accttccgcgacgcggccttcgcccacggcgttcccgcctcttcggtgagcggcaccggg
acatccccgaccgacccgctgcgcgtctccgccgccgcggtccaccgcaaggccctggac
gcgctcgtggaccaggcgtcgctcgtgcgcggcggcaactactcggacggttcctggacc
gtgttccgggcggcgctcgaacgcgcccgcaccgtcctcgcggaccgcgcctccgcggcg
ggcaccctcatggccgcgtacgacgcgctgcgctccgccatcgacgcgctcaccctcgac
gagggcggttacgccgtcctgcaggccgagtcgcccgacgagaaggagggccccagcctc
accagcgagcgcaacaactcggacggcaacctcggcggtgtgaccgagggctcgtgggaa
cgcttcaccaagctggacttcggcggtgtcgccccgcgcagcgtgtccgtgcgctacgcc
aactcgcaggcgacgaacgcgaagccgagcagtgtcgacgtccacgccggcaccgccgac
gggcccgtcgtcgccaccgtctcgctgcccggaaccggtggctggcagtactggagcacc
gtgcaggccgccatcaccgacccggaggccctgctggccgcgaagagcgcgacgttcgtc
ttccacgcaccgcccggccagcagtgggtggcgaacttcgactggcaccagttctcgccg
tacgagctgtccacgtcccccacgacctcgctcgccacactgaccgcggtcaacagcacg
gcgaccggcgacggttcgctgccgctgaagctcggcaacggcatcttcgagaacgtgacg
aacggcgcgtgggcgcagtggaaggacatcgccctgcgcaacggcgcggacaccgtcacc
gtccgctatgacaagccccagtcgcgggcggcgtcggactcgcacatcgagctgcgcctg
ggttcgaaggacggcgagaagcacgtcgacatccccctcgactacaccggttcgggatgg
ggcaccatcgccaccacgtccgtccatctcgacccgagcgtcttcgccggcgtccaggac
gtgtacgcggtgttcgtctccggcacgcactccgatgctcagccgtacgtcggcaacgtc
tactcgctgaccgtgacgcagaacgccgacacccccgtgggcttcgacgccaccgcgttc
cgctcgcacagcgggggcggcctgaagagcgagccggtcgggtggaccggttcggggtcc
accaccaacctcggcgggacctacgacggagcctggctggactacgggaccatcgacttc
ggcagttccccgaagaacaccgtcacgatcagctacgtcaacaactcggcgcgctgcggc
acgaattccgccgtcgagctctacctcggttcgttcgacgcggcgaacccccggacgccg
tacgcgaccgtgccgctgccggtgacggggagcgcgtggtcggcgggcgggacgacgagc
ctgacgctgcccgaggcgatcaccggcgagcacgccgtgcatctgcggctggtgacgacc
ccggacgcctcgcacccgtacgtcgcgaacctggcccggttcaccttcgcccacgtcgag
gagcccgccgagacggacaggtccgcgctgcggaaggcgatcgagcggttcgagggcctc
tccgatgacgcggagcgctacggcacgatcgacttcggtgtgttcctgcgggaactcgcg
gcggcacgcgccctcgtcgacgccgaggacgcgacgcagctcgaggccgacgcgcacacg
cgcagcctcaccctcgcggccaaccagctcgtcccgctgccgcggctgaagctggaggac
ctggtcgcgaccgcgtcggccgtagtggacgaccgctacaccgacgcctcgtggacggcg
ttcaccacggcactcgccgaggcgaagaccgcgatcgcggcggacaaggccacggacgag
acactcaacgcccgttacgaggcactgcgcaacgccatgtccgcgctcaaggccaaaccg
aagacggtgccggccgcgccggacgccgtgtcggcgacctcgtccggttcgagcctgacc
gtcgcctgggcggcgcccgaggacaccggcggctcacgggtcgtcgcctacaaggtcacg
ctcaacgacggccacgaggtcaggatcgacgacccggacagccggagcacgacgttcacc
tggctgcggcccggcaggacgtacacggcgcgcgtccaggcggtgaacgcctacggcgcc
tcccggccgagcgccgccaccgcacccgtggtgatcggcggcggcaccccgcagaagccg
ggcgtgacgtccgtgaccaccgacggcacgcaggtccgtgtgacctggcaggcggcgggt
gacggcggcttcccggtcatcggctacaccgtggccctcggcgacggcaccaccgcgcac
gtctcccccacggcggacacggcactgctcacggccaagaaccggggcaaggcgcacacc
gccaccgtcacggccgtcaccctcgccgggacctccgacgaacgacccgaggccaccccg
gtgaccaccggctcggccgccgcgactgcggccccggcgtacgagccgtcgcccttcccg
gacgacgtactcgacgccacctacgcgtccgacaagtggccgggcacggatggcgggacg
ggctacttccagggcctgctgaacgggttcaaggacctcggctccggcgtcctcgccgcc
gacaccaaggtgccgggcggcaccccgctcaccgccgagaacgacaagatcgccgtacgc
atcaacaacgcggcgacccagaagggggtggaccgggccgtggtcgacgcggccaacagc
tccaccatcacgatggcggacggtctcggctcccggctcggcccgctctacctggacgcg
ctgaagggcggccggctgccgaagaccagtgcgctgttctcccgcgtcaccaagggcctc
gacctgggcggcgcggccaaggaccactacggctaccagcgtccgtacgtgcggctcggg
ttcgtcggcgacggcggcgccatctacgagtcgcaggaccgctcctacggcggcctcacc
acgagcggttcgtacccgagcgggcacacttacggcggctacgaggccggcaccatcctc
gccacgctgctgccggagctggcgccgtcgatcctcgcccgcgcctcggagtacggggac
aaccgcatcgtcctcgggttccactacccgctcgacgtcatgggcggccgtatcgccgcg
caggccaccgtcgcacaccggtgggcggacccggacttcgcggagcttctgacgcaggcc
cacaccgagatgcggaacgtgctgctcgcgcagtgcgagagggaggggtacggcgacacg
ctggaggcctgcgcgggtgagccttacgccggtctgagcacggcgcagcaggtcgacctg
tacacgcagcgcctggactacggcttctcgaaggtcgggaagtccgggcaggccctcgaa
gcaccggccgacgcggcggccctgctgaccacggccttcccgaacctgagcaccgagcag
cgcacgcagatcctcgagcagaccgcgacggactccggccgcccgctggacctcacctcg
tccggcggggcgagctgggagcggatcaacctcgccgccgcgctgtcggcacgtgtggtc
gtgaacgccgatggttcggtcaaggtgacgaactactcggacgccacgaaggccgccgac
gccgacgtcgcggcgatcaaggtgggtggcgtcgcggtcgacgggttcgacccggccgtg
tcgacgtacgtcgtcgactggccgaggggcaggcggatcccggccgtgtccgccgtgccg
gctcagtccggggcgcgggtgaaggtgagcgagggcagcgcggttctgtcgtcggacggg
caccggttcagcacccgcaccatcaaggtgacgtcggccgacggttcggtgacgcggacg
tacacggtcgggttccagctcaccgatcgcgacgaacggccggtcgcggccggtggcaat
ggcggcgaccgcgccggcggagcgtcaggcgttgtgagaggcggagacgccggagcaggc
tcgggcgggggcggcggcttgtggtcgcctgcggccgagtgggccgatccgctgcggatc
gcgtgggggcgcggggcgtactga
DBGET
integrated database retrieval system
