Streptomyces nigra: DC008_03725
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Entry
DC008_03725 CDS
T05839
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
snz
Streptomyces nigra
Pathway
snz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DC008_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_03725
Enzymes [BR:
snz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DC008_03725
DNA repair and recombination proteins [BR:
snz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DC008_03725
Prokaryotic type
DC008_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWE48901
LinkDB
All DBs
Position
812135..812812
Genome browser
AA seq
225 aa
AA seq
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MAPRPLHEIVEPGWAKALEPVADRIAAMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDEV
RVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLINIYRELGSDLGLPQPSNGDLTPWTQ
QGVLLLNRALTTAPRKPAAHRGKGWEEVTEQAIRALAARGKPLVSILWGRDARNCRPLLG
TLPSVESAHPSPMSADRGFFGSRPFSRANDLLIQQGGQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggctccacgacccttgcatgaaatcgtcgaaccgggctgggcgaaggccctggaaccg
gtcgccgaccggatcgccgcgatgggggacttcctgcgcgccgagatcgcggccggacgc
acctatctgccggccgggccgaacgtcctgcgggcgttccagcagccgttcgacgaggtg
cgggtcctgatcgtcggtcaggacccctaccccaccccggggcacgccgtcggtctgtcg
ttctcggtggctcccgaggtacgtccgctgcccggcagtctcatcaacatctaccgggag
ctgggttccgacctggggctgccgcagccgtccaacggcgatctgacgccctggacccag
cagggcgtgctgctgctcaacagggcgctcaccacggccccgcgcaaaccggcagcgcat
cgcggcaagggctgggaggaggtcaccgagcaggcgatccgcgcgctcgccgcgcgcggc
aagcctctggtgtccatcctgtggggccgcgacgcccgcaactgccgtccgctgctcggg
acccttccgtcggtggagtcggcgcatccctcgccgatgtcggccgaccgcggattcttc
ggctcgcgtccgttcagccgggccaacgacctactgatccagcagggcggtcagcccgtg
gactggcgtctgccgtga
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