KEGG   Streptomyces nigra: DC008_05675
Entry
DC008_05675       CDS       T05839                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
snz  Streptomyces nigra
Pathway
snz03030  DNA replication
snz03430  Mismatch repair
snz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:snz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DC008_05675
   03430 Mismatch repair
    DC008_05675
   03440 Homologous recombination
    DC008_05675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snz03032]
    DC008_05675
   03400 DNA repair and recombination proteins [BR:snz03400]
    DC008_05675
Enzymes [BR:snz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DC008_05675
DNA replication proteins [BR:snz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DC008_05675
DNA repair and recombination proteins [BR:snz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DC008_05675
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: AWE49255
LinkDB
Position
1234724..1235449
AA seq 241 aa
MACWYEGPLAAFDTETTGVDVETDRIVSAAVVVQDAPGTRPRVTRWLVNPGVPVPEAATA
VHGLTEDHLQRHGRWPAPVMQEIAEELAVQATAGRPLVVMNAPFDLTLLDRELRRHRASS
LSRWFETRSLTVLDPRVLDKHLDRYRKGRRTLTDLCAHYEVELEDAHDAAADALASLEVV
RAVGRRFAARLERLSPAELHTLQAVWHAAQARGLQAWFARSGTEESVDPAWPLRPDLPAA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgtgctggtacgaaggcccgctggcggcattcgacacggagacgacaggcgtggac
gtcgagaccgaccggatcgtttcggcggccgtcgtcgtccaggacgccccggggacccgg
ccccgggtgacgcgctggctggtgaacccgggcgtgccggtgccggaggcggcgacggcg
gtgcacggactgacggaggatcacctccagcgccacggccgctggccggcgccggtgatg
caggagatagccgaggagctggcggtgcaggcgacggcgggccgcccgctcgtggtgatg
aacgcgccgttcgatctgacgctgctggaccgcgagttgaggcggcaccgcgcctcgtcg
ctgtcccgctggttcgagacgcggtcgctgacggtgctcgacccacgcgtcctcgacaag
catctggaccgctaccgcaaggggcgccgcaccctgaccgacctctgcgcgcactacgag
gtcgagctggaggacgcgcacgacgcggcggccgacgcgctggcgtcgctggaggtcgtg
cgcgcggtgggccggcgcttcgctgcccggctggagcggctgtccccggcggagctgcac
acgctccaggcggtgtggcacgcggcgcaggcccgtggcctgcaggcgtggttcgcgcgc
agcggcacggaggagtcggtggacccggcgtggccgctgcgcccggatctcccggcggcg
gcctga

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