Streptomyces nigra: DC008_05795
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Entry
DC008_05795 CDS
T05839
Name
(GenBank) 5,6-dimethylbenzimidazole synthase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
snz
Streptomyces nigra
Pathway
snz00860
Porphyrin metabolism
snz01100
Metabolic pathways
snz01240
Biosynthesis of cofactors
Module
snz_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
DC008_05795
Enzymes [BR:
snz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
DC008_05795
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Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Nitroreductase
Motif
Other DBs
NCBI-ProteinID:
AWE49272
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All DBs
Position
complement(1252329..1256168)
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AA seq
1279 aa
AA seq
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MTDTGQVPGEGLPESAGMVEQPGVPAAPDAYSYLSETPAEEEDLLLPGSQGAWGNEVAPP
APEPVVEAVHEPDAHELSGRDSGSVDLTGVRLPGPATPTAPTTPIPPITPRRPLHLGPPI
PDTSASPVRSLADRGAVGMPARQPGPAVPEYAETAQAPAPAGAWGAPVPGPVTAEAQTAE
TVVPVPVAEPVGAAQAVVARVATEAGAAAAQVAEAQAPVGQDETYGAPEPSPEHAAADPG
QAGAPTPVAHEAQGDAAAADPVGQEPGDGGQAQPVEPAPQDVPVDAVPQGVPAGEPAQVP
VGPEGPEGAEHGEVPVPEAVVPEEPQPVAEAVVEAEPEGVVQEAVVVEAPEAASQDTEAP
ADGELPAPHAAEVPGSTEPAQAVPEAEPAETPEPAPAHASQAMAEAHVPEPAAEAHVPEP
AAEAHAPEPIAEAYAPAQALPPHAPAGALAPEPLPAEPEAGVQPGAPEQAEPPADQAAHP
EPRTEAPAPQAQAQAPEQPDQAPAAEEAAVQPSEPAPAEQSAQTPEPLAAHAGQPSPETA
PQADTAVPAEPAETVQPLAAAAPAPAMAPIPDQPSAEQQQYLAEPAGPQLRPAAHPDEAV
AVMPGAVPQEPAPGQPLGRFVPVEGTVPTTPHLAPTPPQPLILPTEEPQDPAVAEVPAPR
EADAGLVQHADDLDTRAADEDRADQDAQTEEVPAEAEPRGNGGPAAPGYDDAEREAVLKV
MRERRDIRNGFRSDPIPHEVLLRVLEAAHTAPSVGHSQPWDFVVIRSSETRRTMHELAMR
QREAYAKSLPKGRAKQFKELKIEAILDTPVNIVVTADPTRGGRHTLGRHTQPQMAPYSAA
LAVENLWLAARAEGLGVGWVSFFDEREMVRALGLPEHLEVIAYLCVGYVDEFPDEPELLQ
AGWSKRRPLSWVVHEETYGRRALPGEEPHDLLAETVAQIRPLDAKALGEAWERQKRMTKP
AGALGMLEIISAQLSGLSRQCPPPIPEPAAVAIFAGDHGVHAQGVTPWPQEVTAQMVANF
LGGGAVCNAFAAQVGAEVCVVDVGVAADLPATPGLLPRKVRAGTADMTTGPAMSREEAKQ
AIEVGIETARDLVAAGNKALLTGEMGIANTTASAALISLYTGTDPAEVTGRGTGINDETL
ARKTEVVRRALDFHQPDPADPIGVLAAIGGLEHAALVGLLLGGASLRTPVILDGVSAGAA
ALVARAIAPEVLAACIAGHRSAEPGHVAALNKLGLRPLVDLDLRLGEGTGALLALPLVQS
TARAMHEVATFDSAGVTEK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccggccaggtcccgggcgagggactgccggagagcgcaggcatggtggag
cagccgggcgtccccgcggcgccggatgcgtacagctacctctccgagactcccgctgaa
gaagaagacctgctgctgcccggctcccagggcgcctggggcaacgaggtcgctccaccc
gcgccggagccggtcgtcgaggccgtgcacgagccggacgcgcacgagctctccggccgt
gacagcggctccgtcgacctgaccggcgtccgactgcccgggcccgccacgcccacggcc
ccgacgacgccgatccctccgatcacccccaggcggcccctgcacctgggcccgcccatc
ccggacacctccgccagcccggtccgctcgctggccgaccggggcgccgtcggcatgccg
gcccgccagccgggaccggccgtccccgagtacgccgagacggcgcaggccccggcgccc
gcgggggcctggggtgcgcccgtccccgggccggtgaccgcggaggcccagactgccgaa
acggttgttccggttccggtcgcagagccggtcggggccgcgcaggcggttgtggcgcgc
gtcgccaccgaggccggggccgctgccgcgcaggtcgctgaggctcaggcgccggtgggg
caggacgagacgtacggtgcgccggagccgtcgcccgagcatgcggccgctgatccgggg
caggccggggcgccgacgccggtcgcgcatgaggcgcagggtgacgctgccgccgccgat
cctgttgggcaggagcccggggacgggggacaggcccagccggtcgagcccgccccgcag
gacgttccggtcgacgccgtcccgcaaggggttccggccggcgagcccgcgcaggtcccg
gtggggccggagggccccgagggcgcggagcacggcgaggtgccggtgcccgaggccgtc
gtaccggaggagccgcagccggtggccgaggccgtcgtcgaggcggagcccgaaggcgtc
gttcaggaggcggtggtcgtagaggcgcccgaggccgcctcgcaggacacggaggctccg
gccgacggtgaactgcccgctccccatgccgcagaggttccgggcagcaccgagccggcc
caggccgtccccgaggccgagcccgccgagacccccgagcccgccccggcgcatgcctca
caggccatggcagaggcgcacgtcccggagcccgcagcggaggcacacgtcccggagccc
gcagcggaggcacacgcgccggagcccatcgcggaggcctacgcccccgcccaggcgctc
ccgccccacgccccggccggggccctggcccccgagcccctccccgccgagccggaagca
ggcgttcagcccggcgccccggagcaggccgagccgccggcggaccaggcagcgcatccc
gagccgcggaccgaggcccccgcgccgcaggcacaggcacaggcccccgaacagcccgac
caggcccccgccgccgaggaggccgccgtgcagccgagcgagcccgccccggcggagcag
tcggcccagacgcccgagcccctggcggcacacgccggtcagccgtcgccggagaccgcc
ccccaggccgacacagccgtccccgccgaacccgcggaaaccgtccagccgctcgccgca
gcggcaccggcaccggcgatggcccccatcccggaccagccctcggccgagcagcagcag
tacctcgccgaaccggccggcccccagctcaggccggccgcccacccggacgaggccgtg
gccgtgatgcccggtgccgtcccgcaggagccggcgcccggtcagcccctcggccggttc
gtcccggtcgagggcaccgtgccgaccacgccgcacctcgcgcccaccccgccgcagccg
ctgatcctgcccaccgaggagccgcaggaccccgccgtcgccgaggtgcccgcaccccgc
gaggccgacgccgggctcgtccagcacgccgacgacctggacacccgggccgccgacgag
gaccgggcggaccaggacgcgcagaccgaggaggtcccggccgaggcggagccgcgcggc
aacggcggtcccgccgcgcccggctacgacgacgccgagcgcgaggccgtcctcaaggtg
atgcgcgagcgccgcgacatccgcaacggcttccgcagcgaccccatcccgcacgaggtg
ctgctccgggtcctggaggccgcccacaccgcgccctccgtcggccactcccagccctgg
gacttcgttgtcatccgctcctcggagacccggcgcaccatgcacgaactggccatgcgc
cagcgcgaggcgtacgccaagtcgctgcccaagggccgggccaagcagttcaaggaactg
aagatcgaggccatcctcgacaccccggtgaacatcgtcgtcaccgccgaccccacccgc
ggcggccgccacaccctcggccggcacacccagccgcagatggcgccgtactccgccgcc
ctcgcggtcgagaacctctggctcgccgcccgcgccgagggcctcggcgtcggctgggtc
agcttcttcgacgagcgcgagatggtccgcgccctcggcctgcccgagcacctggaggtc
atcgcctacctgtgcgtcggatacgtcgacgagttcccggacgagcccgagctgctccag
gcgggctggtccaagcgccgcccgctgtcctgggtcgtccacgaggagacgtacggccgc
cgcgccctgcccggcgaggagccgcacgacctgctcgccgagaccgtcgcgcagatccgc
ccgctggacgccaaggcgctcggcgaggcgtgggagcgtcagaagcgcatgaccaagccg
gccggcgcgctcggcatgctggagatcatctccgcgcagctgtcgggcctgtcccggcag
tgcccgccgccgatcccggagcccgcggccgtcgcgatcttcgcaggggaccacggtgtg
cacgcccagggcgtcaccccctggccgcaggaggtcacggcccagatggtcgccaacttc
ctcggcggcggcgcggtctgcaacgccttcgccgcccaggtcggcgccgaggtctgcgtg
gtcgacgtcggcgtggcagccgacctcccggcgaccccgggcctgctgccccgcaaggtc
cgcgccggcaccgccgacatgacgaccggtcccgcgatgtcccgcgaggaggccaagcag
gccatcgaggtcggcatcgagaccgcccgcgacctggtggcggccggcaacaaggccctg
ctgaccggtgagatgggcatcgccaacaccacggcgtccgccgcgctgatctccctgtac
accgggaccgacccggccgaggtcaccggccgcggcaccggcatcaacgacgagacgctg
gcccgcaagaccgaagtcgtccggcgtgcgctggacttccaccagcccgacccggccgac
cccatcggggtcctcgccgcgatcggcggcctggagcacgccgcgctcgtcggcctgctg
ctcggcggcgcctccctgcggacgcccgtcatcctggacggcgtgagcgccggcgccgcc
gcactggtggcccgcgcgatcgcccccgaggtgctcgccgcctgcatcgcgggtcaccgc
agcgccgaacccggccatgtggccgccctgaacaagctcggtctgcgcccgctggtcgac
ctcgacctgcggctcggcgagggcacgggcgcgctcctggccctcccgctcgtccagagc
acggcccgggcgatgcacgaggtggcgacgttcgactcggcgggagtcaccgagaagtaa
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