Streptomyces nigra: DC008_05865
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Entry
DC008_05865 CDS
T05839
Name
(GenBank) TetR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snz03000
]
DC008_05865
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
snz01504
]
DC008_05865
Transcription factors [BR:
snz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DC008_05865
Antimicrobial resistance genes [BR:
snz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
DC008_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
Xre-like-HTH
HTH_24
HTH_31
LacI
HTH_IclR
HTH_AsnC-type
DUF6471
TrmB
Phage_CII
MerR
SpoIIID
AbiEi_4
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
AWE49286
LinkDB
All DBs
Position
complement(1268135..1268686)
Genome browser
AA seq
183 aa
AA seq
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MAVDREHVLRSAAALLTRKATATMDEVAKAAGISRATLHRQFAGRDALVRALESLGIAEC
EAALDVADLDSGSAADAVRRLVRAVEPAAGLLAFLYTENQLYEGERINPGWTAIDDRIAA
LFRRGQLAGEFRIDLTPAWLTEALFGLMASGAWMVQSGKGAPRDFHHMIVGLLLGGALRR
EES
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgatcgtgaacacgtgctgcgcagtgccgcggccctgctgacccgcaaggcc
accgcgaccatggacgaggtcgccaaggccgccgggatcagccgcgccaccctgcaccgg
cagttcgcgggccgcgacgcgctcgtgcgcgccctggagtccctgggcatcgccgagtgc
gaggccgcgctggacgtggccgacctcgacagcggctccgccgccgacgccgtacgccgg
ctcgtgcgcgccgtcgagcccgccgcgggactcctcgccttcctctacacggagaaccag
ctctacgagggcgagcggatcaaccccggctggacggcgatcgacgaccgtatcgccgcc
ctgttccggcgcggacagctcgccggggagttccgtatcgacctgaccccggcctggctc
accgaggcgctgttcggcctcatggcctccggcgcctggatggtgcagagcggcaaggga
gccccccgggacttccaccacatgatcgtcgggctgctgctcggcggcgcactcaggaga
gaggaatcatga
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