Streptomyces nigra: DC008_06010
Help
Entry
DC008_06010 CDS
T05839
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
snz
Streptomyces nigra
Pathway
snz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DC008_06010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snz01007
]
DC008_06010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snz03016
]
DC008_06010
Enzymes [BR:
snz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DC008_06010
Amino acid related enzymes [BR:
snz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DC008_06010
Transfer RNA biogenesis [BR:
snz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DC008_06010
Prokaryotic type
DC008_06010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AWE49307
LinkDB
All DBs
Position
complement(1294014..1296527)
Genome browser
AA seq
837 aa
AA seq
DB search
MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEQLGADLKGPLVVGQVLTIEELE
GFKKPIRFCTVDVGQANGTGEPQEIVCGARNFSVGDKVVVVLPGATLPGGFSISARKTYG
KTSHGMICSSDELGMGDDGTHGIIVLPPETEVGKDAIELLELVDEVLDIAVTANRGDCLS
IRGVARETAIAYGLPLRDPALLDVPGPNAFGYPVQVSDPLGCDRFTARTVTGLSPEARSP
IWLQRRLQKVGMRPISLAVDITNYVMMELGQPLHAYDRSRVQGTIGVRRAEEGEKLVTLD
GVERKLHAEDLVITDERGPIGLAGVMGGANTEIADHEDLENATSDIVIEAAHFDQVSIAR
TARRHKLSSEASRRFERGVDPAAAAAAAQRTVDLLVLLAGGTAEAGVTEVVTPSAPHTIT
TPADHPDKVAGVEYGRETVVRRLQQIGCDVYGQDELIVTVPSWRPDLLEPNDLAEEVIRL
EGYENLPSTLPKPPSGRGLTARQRLHRRVGRALAGTGYVEAPNYPFVSEQIFDQLGLDAD
DPARRVVKLVNPLNDEEPALRTSLLPGLLAALRRNDGRGTHDLALFETGLVFQPREERAA
AGHLPVDRRPTDEELAALDAVLPDQPRHVAAVLAGAREQAGWWGPGRPAGWADAVEAARL
VAREARAALTVRAGQYGPWHPGRCAELVITVDGSERVVGHAGELHPRVLKALHLPARTCA
MELDLDALEQVGDDTPQAPSISTFPVATQDVALVVDKPVPAAEVEAALREGAGELLEAIR
LFDVYENEEQLGDGRKSLAYALRFRAADRTLTVDEASAARDAAVALAGERTGAVLRG
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcccgctttcttggctgcgggagtacgtcgacctgccggccaccgagaccggc
cgcgacgtgcaggccaagctcatttcggccggcctggaggtcgagaccgtcgaacagctc
ggcgccgacctcaagggcccgctggtcgtcggccaggtgctgaccatcgaggagctggag
ggcttcaagaagccgatccgcttctgcaccgtcgacgtcggccaggccaacggcaccggt
gagccgcaggagatcgtctgcggcgcccgcaacttctccgtcggcgacaaggtcgtcgtg
gtcctgcccggcgccaccctgcccggcggcttctccatcagcgcccgcaagacctacggc
aagacgtcccacggcatgatctgctccagcgacgagctgggcatgggcgacgacggcacc
cacggcatcatcgtgctgccgccggagaccgaggtcggcaaggacgccatcgagctgctc
gaactggtcgacgaggtcctggacatcgccgtcaccgccaaccgcggcgactgcctgtcc
atccgcggcgtcgcccgcgagaccgccatcgcctacggcctgccgctgcgcgacccggcc
ctgctcgacgtgcccggcccgaacgccttcggctacccggtgcaggtctcggacccgctc
ggctgcgaccgcttcaccgcccgtacggtgaccggcctcagccccgaggcgcgctcgccg
atctggctccagcgccggctgcagaaggtcggcatgcgcccgatctcgctcgccgtcgac
atcaccaactacgtgatgatggagctcggtcagccgctgcacgcctacgaccgcagccgc
gtccagggcaccatcggcgtgcgccgggccgaggagggcgagaagctcgtcaccctcgac
ggcgtcgagcgcaagctccacgccgaggacctggtcatcaccgacgagcgcggccccatc
ggcctcgccggcgtcatgggcggcgccaacaccgagatcgcggatcacgaggacctggag
aacgcgacctccgacatcgtcatcgaggccgcccacttcgaccaggtgtcgatcgcccgt
acggcccgccgccacaagctgtcctccgaggcgtcccggcgcttcgagcgcggcgtcgac
ccggccgccgccgcggccgccgcgcagcgcaccgtcgacctgctggtgctgctcgccggc
ggcaccgccgaggccggtgtcaccgaggtcgtcacgccgtccgcgccgcacaccatcacg
acgccggccgaccaccccgacaaggtcgcgggcgtcgagtacggccgggagaccgtcgta
cggcggctgcagcagatcggctgcgacgtgtacgggcaggacgagctgatcgtcaccgtg
ccgtcctggcggcccgacctgctggagccgaacgacctcgccgaggaggtcatccggctg
gagggctacgagaacctgccctccaccctgccgaagccgccgtccggccgcggtctcacc
gcccgccagcggctgcaccgccgcgtcggccgcgcgctggccggcaccggctacgtcgag
gcgccgaactacccgttcgtcagcgagcagatcttcgaccagctcggcctggacgccgac
gacccggcccgccgtgtcgtcaagctcgtcaacccgctcaacgacgaggagcccgcgctg
cgcacgtcgctgctgccgggtctgctcgccgcgctgcggcgcaacgacggacgcggcacg
cacgacctcgcgctgttcgagaccggcctggtcttccagccgcgcgaggagcgggcagcc
gccgggcacctgcccgtggaccggcgcccgaccgacgaggaactggccgcgctcgacgcc
gtgctgcccgatcagccccggcacgtggccgcagtcctcgccggtgcccgcgagcaggcc
ggctggtggggccccgggcgtcccgccggatgggccgacgccgtcgaggcggcccggctc
gtcgcccgtgaggcgcgggccgcgctgacggtccgcgccgggcagtacgggccgtggcac
cccggccgctgcgccgaactggtcatcaccgtggacgggtcggagcgggtcgtcgggcac
gccggtgaactgcacccgcgggtcctgaaggccctgcacctgcccgcgcggacctgcgcg
atggagctggacctggacgcgctggagcaggtcggcgacgacacgccccaggcgccgagc
atctccaccttccccgtcgccacgcaggacgtcgccctcgtcgtcgacaagccggtcccg
gccgccgaggtcgaggccgcgctgcgcgagggcgcgggtgaactgctggaggccatccgg
ctgttcgacgtgtacgagaacgaggagcagctcggcgacggcaggaagtcgctggcgtac
gccctgcggttccgcgccgcggaccggacgctgacggtggacgaggcatcggccgcgagg
gacgccgcggtggccctcgcgggcgagcggaccggagccgtgctgcgcggctga
DBGET
integrated database retrieval system
