Streptomyces nigra: DC008_07610
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Entry
DC008_07610 CDS
T05839
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
snz
Streptomyces nigra
Pathway
snz00550
Peptidoglycan biosynthesis
snz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DC008_07610
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
DC008_07610
Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DC008_07610
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Aida_C2
Motif
Other DBs
NCBI-ProteinID:
AWE49595
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Position
1633267..1634712
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AA seq
481 aa
AA seq
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MNKTIRRASVFTLLLVLALLGRATWVQFYDGRALADDKDNRRNTIALYSAPLGDIIVGGK
PVTGSARTTGGDLAYKRTYRDGSLYSAVTGYSSQAFGATQLEGVYRDLLDGTDNRLKGVL
DTVTNKRSDPGNVVTTIDPAVQKAAYEALGDKKGAAVAIDPATGRILAVASTPSYDPTTI
TTGDADAWKALTSDPDKPMTNRALRQPLPPGSTFKLVVAAAALEDGLYESVDEPTDSPDP
YPLAQSNSKLTNENPSAPCEDASLRVALQYSCNNVFASVAVDLGQDKVRAMAEKFGFNDD
KQDVPVRAYESVYPTGMDKAQTALSGIGQFDVTATPLQIAMVSAAIANGGKLVSPHMVAQ
ITDGNGDVLEDYDDSAGSEEIVGSRTAEQLQSAMRTVVEEGTGTNARIAGATVGGKTGTA
QHGEKNSKTPYAWFTSYGKADGKEVAVAVLVEQSNAARSEVSGNGLAAPVARKVMEAALR
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacgatcaggcgggcctccgtcttcacactgctcctggtgctcgccctgctg
ggcagggcgacctgggtgcagttctacgacggccgggccctcgcggacgacaaggacaac
cggcggaacacgatcgcgctgtacagcgcgccgctcggggacatcatcgtgggcggcaag
ccggtcaccggctccgcgcggacgacgggcggcgacctggcgtacaagcggacgtaccgg
gacggctcgctgtactcggccgtgaccgggtacagctcgcaggcgttcggcgcgacccag
ctcgagggcgtctaccgcgatctgctggacggcacggacaaccgtctcaagggcgtgctg
gacacggtgacgaacaagcggtccgacccgggcaacgtggtgaccacgatcgacccggcc
gtgcagaaggccgcctacgaggcgctcggcgacaagaagggggccgccgtcgcgatcgac
ccggccacgggccgcatcctggcggtcgcctccaccccgtcgtacgacccgacgacgatc
accacgggtgacgcggacgcctggaaggcgctgacctccgacccggacaagccgatgacg
aaccgcgcgctgcgccagccgctgccgccgggctcgacgttcaagctggtcgtcgcggcg
gccgcgctggaggacggcctgtacgagtcggtggacgagccgacggacagcccggacccg
tacccgctggcgcagtccaacagcaagctgacgaacgagaacccctcggcgccctgcgag
gacgcctccctccgcgtcgccctgcagtactcgtgcaacaacgtcttcgcgagcgtcgcc
gtcgacctgggccaggacaaggtccgcgcgatggccgagaagttcggcttcaacgacgac
aagcaggacgtgccggtgcgggcgtacgagagcgtgtacccgacgggcatggacaaggcg
cagaccgcgctgtccggcatcgggcagttcgacgtcaccgcgactccgctgcagatcgcc
atggtgtccgcggccatcgccaacggcggcaagctggtctcgccgcacatggtcgcgcag
atcaccgacggcaacggtgacgtcctggaggactacgacgacagcgcgggcagcgaggag
atcgtcggctcccgcaccgccgagcagctgcagtcggcgatgcgcacggtcgtcgaggag
ggcaccggcaccaacgcgcggatcgcgggcgcgacggtcggcggcaagacgggcaccgcc
cagcacggcgagaagaacagcaagacgccgtacgcctggttcacgtcctacgggaaggcc
gacggcaaggaggtcgccgtggcggtgctggtggagcagtcgaacgccgcccgctccgag
gtcagcggcaacggcctggccgcccccgtggccaggaaggtgatggaggcggccctgcgc
gcctag
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