Streptomyces nigra: DC008_07890
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Entry
DC008_07890 CDS
T05839
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
snz
Streptomyces nigra
Pathway
snz00190
Oxidative phosphorylation
snz00860
Porphyrin metabolism
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DC008_07890
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
DC008_07890
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
snz01006
]
DC008_07890
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
snz03029
]
DC008_07890
Enzymes [BR:
snz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
DC008_07890
Prenyltransferases [BR:
snz01006
]
Compound prenylation
Protoheme farnesyltransferase
DC008_07890
Mitochondrial biogenesis [BR:
snz03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
DC008_07890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
AWE49648
LinkDB
All DBs
Position
complement(1686100..1687053)
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AA seq
317 aa
AA seq
DB search
MCVTAVESRPAGIVGTSQSPSRRPIGARVAAFVALTKPRIIELLLITTVPVMFLAERGVP
DLGLVLLTCVGGYLSAGGANALNMYIDRDIDALMDRTSQRPLVTGMVSPRECLAFGITLA
VVSTLLFGLTVNWLSAWLSLGALLFYVVVYTMLLKRRTSQNIVWGGIAGCMPVLIGWSAV
TNSLSWAPLILFMVIFFWTPPHYWPLSMKVKEDYARVGVPMLPVMASNKVVAKQIVLYSW
VMVAVSLLLTPLGYTGWFYTAVALGAGGWWLWEAHALQNRAKAEVTGAKLKEMRLFHWSI
TYVSLLFVAVAVDPFLR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgtgacggccgttgaatcccgtccagcggggattgtcgggacgagccagagcccg
agccgacggccgatcggggcccgggtcgcggcgttcgtggcgctgaccaagccgcggatc
atcgagctgctgctcatcaccaccgttccggtgatgttcctggccgagcggggcgttccc
gacctcggactggtgctcctcacctgtgtgggcggttacctcagcgcgggcggcgcaaac
gcgctcaacatgtacatcgaccgcgacatcgacgccctgatggaccgcacctcccagcgt
cccctggtcaccgggatggtcagtccgcgcgagtgcctggccttcggcatcaccctcgcg
gtcgtgtcgacgctgctcttcggcctcaccgtcaactggctgtcggcgtggctgtcactc
ggagcgctcctcttctacgtcgtcgtctacacgatgctgctcaagcgccgtacctcgcag
aacatcgtgtggggcggcatcgcgggctgtatgccggtgctgatcggctggtccgccgtc
acgaactccctctcctgggcgccgctgatcctcttcatggtgatcttcttctggacgccg
ccgcactactggccgctgtccatgaaggtgaaggaggactacgcgcgcgtgggcgtgccc
atgctccccgtcatggcctccaacaaggtcgtcgccaagcagatcgtcctctacagctgg
gtgatggtcgcggtctcgctgctgctgacgccgctcggctacacgggctggttctacacc
gcggtcgcgctcggcgcgggcggctggtggctgtgggaggcgcacgcgctgcagaaccgc
gcgaaggccgaggtgaccggcgcgaagctcaaggagatgcgcctgttccactggtcgatc
acctatgtctcgctgctcttcgtggccgtcgcggtcgaccccttcctgcgctga
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