Streptomyces nigra: DC008_08320
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Entry
DC008_08320 CDS
T05839
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
snz
Streptomyces nigra
Pathway
snz03030
DNA replication
snz03410
Base excision repair
snz03420
Nucleotide excision repair
snz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DC008_08320
03410 Base excision repair
DC008_08320
03420 Nucleotide excision repair
DC008_08320
03440 Homologous recombination
DC008_08320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snz03032
]
DC008_08320
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_08320
Enzymes [BR:
snz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DC008_08320
DNA replication proteins [BR:
snz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DC008_08320
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DC008_08320
NER (nucleotide excision repair)
GGR (global genome repair) factors
DC008_08320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AWE49724
LinkDB
All DBs
Position
complement(1786473..1789199)
Genome browser
AA seq
908 aa
AA seq
DB search
MADSASKQTDSTPGGGRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHVSRF
AVEGFEADDVIATLATQAEAAGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVLEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVDEVKG
KAGQNLRDHLEAVKLNRRLTELERQVELPKTVADLAREPYDRKAVAMILDTLEIRNPSLR
ERLFGVDPGAEEAETTPVSTEGVALDGTVLGTGELAGWLTEHAGGPLGVATVDTWALGTG
SVAEIALAADSGAAAWFDPSQLDEADEQAFAGWLADPARPKVFHNAKSAMRVFAEHGWTI
EGVHMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAATADGQLAFGADEGAEAEALMI
QARTVLDLGEAFEGRLREVGAAELLRDMELPTSALLARMERHGIAADRAHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKKTKTGYTTDADALAWLAGQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTAASQV
FAVEPAAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARTLMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
NVDRALRESGLASRMLLQVHDEIVLEIAPGEREAAEELVRREMSNAVHLRVPLGVSVGAG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagattcagcatcgaagcagaccgacagcacccccggcggcggccggccccgcctg
atgctcatggacgggcactcactggcctaccgcgccttcttcgcgctgcccgcggagaac
ttcacgacggcgacgggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcc
aacacgctgcgtgacgaggcgcccacccacttcgccgtggcgttcgacgtgtcccgcaag
acctggcgctccgaggagttcaccgagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctgctcgacgcgatgcacgtgtcccggttc
gccgtcgagggcttcgaggccgacgacgtgatcgccactctcgccacccaggccgaggcc
gccggtttcgaggtgctgatcgtcaccggcgaccgtgactcgttccagctggtcagcgag
cacaccaccgtgctctacccgaccaagggcgtctccgagctgacccggttcaccccggag
aaggtcctcgagaagtacggcctcacccccgcccagtacccggacttcgctgccctgcgc
ggcgacccgtcggacaacctgcccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcgggtccttcgccgagctggtcgagcgcgtcgacgaggtcaagggc
aaggccgggcagaacctccgcgaccacctggaggccgtcaagctcaaccgccgcctcacc
gagctggagcgccaggtcgagctgcccaagaccgtcgccgacctcgcgcgcgagccgtac
gaccgcaaggccgtcgcgatgatcctggacaccctggagatccggaacccgtcgctgcgc
gagcggctcttcggcgtcgacccgggtgccgaggaggccgagaccacccccgtctccacc
gagggcgtcgccctggacggcactgtcctcggcaccggcgagctggccggctggctgacc
gagcacgcgggcgggccgctcggcgtggccaccgtcgacacctgggcgctgggcaccggc
tcggtcgccgagatcgccctggccgccgacagcggcgccgccgcctggttcgacccctcc
cagctggacgaggccgacgagcaggcgttcgccggctggctcgcggaccccgcccggccc
aaggtcttccacaacgccaagagcgccatgcgggtcttcgccgagcacggctggaccatc
gagggcgtccacatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgccctgtccctggagtatctgcaccgcgagctggcgcccgccgccacg
gccgacggccagctcgccttcggggcggacgagggcgccgaggccgaggcgctcatgatc
caggcccggaccgtcctcgacctcggcgaggccttcgagggccggctgcgggaggtcggc
gccgccgagctgctgcgcgacatggagctgccgacgtccgcgctgctcgcccgcatggag
cggcacggcatcgcggccgaccgggcccacctggaggccatggagcagatgttcgcgggc
gccgtgcagcaggccgtgaaggaggcgcacgcggcggccgggcacgagttcaacctgggc
tcgcccaaacagctccaggaggtcctcttcggcgagctcgccctgcccaagacgaagaag
acgaagaccggctacaccaccgacgccgacgccctggcctggctcgccggccagacggac
aacgaactgccggtgatcatgctccgccaccgcgagcaggcgaagctgcgggtcaccgtc
gagggcctgatcaagacgatcgcggcggacggccggatccacaccacgttcaaccagacc
gtcgccgccaccggccgcctctcctccacggaccccaacctgcagaacatcccggtccgc
accgacgagggccgcgcgatccgccggggcttcgtcgtcggcgagggcttcgagtccctg
atgacggcggactacagccagatcgagctccgggtgatggcccacctctccgaggacgag
ggcctgatcgaggcgttcacctccggtgaggacctgcacaccacggccgcctcccaggtc
ttcgccgtggagccggccgccgtggacgccgagatgcgccgcaagatcaaggcgatgtcc
tacggcctcgcctacgggctgtcggccttcggcctctcccagcagctgaacatcgaggcg
gccgaggcccgcaccctgatggacgcctacttcgagcggttcggcggcgtccgcgactat
ctgcgccgggcggtcgacgaggcccgcgcgacgggctacacggcgaccctcttcggccgc
cgccgctatctgcccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgc
atggcgctgaacgcgcccatccagggcacggcggccgacatcgtcaagatcgccatgctc
aacgtggaccgcgccctgcgcgagtcgggcctcgcctcccggatgctcctccaggtccac
gacgaaatcgtcctggagatcgcccccggcgaacgcgaggcggcggaggaactggtccgc
cgcgaaatgtcgaacgccgtccacctgagggtccccctgggcgtctcggtgggcgcaggc
cccgactgggaatcagcggcccactag
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