Streptomyces nigra: DC008_09500
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Entry
DC008_09500 CDS
T05839
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snz03000
]
DC008_09500
Transcription factors [BR:
snz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DC008_09500
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_IclR
HTH_3
HTH_26
HTH_Tnp_ISL3
TetR_N
HTH_Crp_2
HTH_6
Motif
Other DBs
NCBI-ProteinID:
AWE49939
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Position
2051733..2052860
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AA seq
375 aa
AA seq
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MTQQPRTGRPTGRPRRPIGVQGGIRQVQSSAVTTRLADIAAQAGVSEATVSRVLNGKPGV
AATTRQSVLAALDVLGYERPVRLRQRSEGLVGLITPELENPIFPALAQVIGQALTRQGYT
PVLATQTPGGSTEDELTEMLVDRGVAGIIYVSGLHADTTADMQRYERLRAQGVPFVLVDG
FSPKVQAPFISPDDRAAMALAVTHLASLGHTRIGLALGPKRFVPVQRKIEGFVRTVQDQL
NLPPDVVERDLVQHSLYTLEGGQAAATALIARDCTAVVCASDMMALGAIRAARQQGLEVP
TDISVVGFDDSPLIAFTDPPLTTVRKPVPAMGQAAVRTLLEEIGGTPAPHSEFVFMPELV
VRGSTASAPGDRARP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagccccgcacgggccggccaacgggtcgccctcggcgtccgattggtgtg
caaggcggcatacgacaggtacagtccagtgccgtgaccacgaggcttgccgacatcgct
gctcaggcgggggtgagcgaagcgaccgtcagccgcgtcctcaacgggaagcccggcgtc
gccgccaccactcgccagtccgtgctggccgcactcgacgtgctcggctacgagcgtccg
gtgcggctccgccagcgcagcgagggcctggtcggcctgatcacacccgagctggagaac
ccgatattcccggcgctcgcccaggtcatcggccaggccctgacgcgtcagggctatacg
cccgtgctggcgacacagacgcccggcgggtccacggaggacgagctcaccgagatgctc
gtggaccgcggggtcgcgggcatcatctatgtctccggtctgcacgcggacaccaccgcg
gacatgcagcgctacgagcggctgcgtgcgcagggcgtccccttcgtcctcgtcgacggc
ttctcccccaaggtgcaggcgccgttcatctcccccgacgaccgggcggcgatggcgctg
gcggtgacccacctcgcctccctcgggcacacccggatcggactggccctcggcccgaag
cggttcgtgccggtgcagcggaagatcgaggggttcgtccggaccgtccaggaccagctg
aacctgccgccggacgtcgtggagcgcgacctggtgcagcactcgctctacaccctggag
ggcgggcaggccgccgcgaccgccctcatcgcgcgcgactgcacggccgtcgtctgcgcc
agcgacatgatggcgctgggcgcgatacgcgcggcccggcagcagggcctcgaggtcccc
accgacatctcggtcgtgggcttcgacgactccccgctgatcgccttcaccgacccgccg
ctcaccacggtccgcaagccggtcccggccatgggccaggccgccgtccgcacgctgctc
gaggagatcggcggaaccccggccccgcacagcgagttcgtgttcatgccggagctggtc
gtacgcggttcgacggcgtcggcgcccggcgaccgggcgcgcccctag
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