Streptomyces nigra: DC008_17305
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Entry
DC008_17305 CDS
T05839
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
snz
Streptomyces nigra
Pathway
snz00730
Thiamine metabolism
snz01100
Metabolic pathways
snz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DC008_17305
Enzymes [BR:
snz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DC008_17305
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
AWE51277
LinkDB
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Position
complement(3746130..3747944)
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AA seq
604 aa
AA seq
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MTIKDARTPASNQDETPVRGESSTEAGKSIGWHKAYVEGSRPDLRVPVRQVHLTNGQSVT
LYDTSGPYTDPAAETDVRRGLPPLRENWIIARGDTAEYAGRPVRPEDDGIKHTAPRGGLR
NLDAVFPGRPRQPRRSRDGRAVTQLAYARRGEITPEMEFVAIREDVDPEVVREEIAAGRA
VLPANVNHPEIEPMIIGKRFLVKVNANIGNSAVTSSIEEEVEKMTWATRWGADTVMDLST
GRNIHTTREWVLRNSPVPIGTVPLYQALEKVDGKAEELTWEIYKDTVIEQAEQGVDYMTV
HAGVRLPYVPLTANRKTGIVSRGGSIMAAWCLAHHKENFLYENFEELCEILAAYDVTYSL
GDGLRPGSIADANDEAQFAELRTLGELNTIAKRFNVQTMIEGPGHVPMHKIKENIDLQQE
ICEEAPFYTLGPLTTDVAPAYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLPNRDDVKT
GVITYKIAAHAADLAKGHPGAQEWDDALSDARFEFRWEDQFNLALDPDTAREFHDETLPA
EPAKTAHFCSMCGPKFCSMKISQDIRRRHGGTQEEIEGEIEQGMAQKSKEFAAAGNRVYL
PLAD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaaggacgcgcgcacgcctgcctcgaaccaggacgaaacgcccgtgcggggc
gaatcctccaccgaggccgggaagtccatcggctggcacaaggcgtatgtcgagggctca
cgccccgacctgcgggtgccggtccgccaggtgcacctcaccaacgggcagtcggtcacg
ctgtacgacacctcgggcccgtacaccgatccagccgccgagaccgacgtccgcaggggg
ctgcccccgctgcgggagaactggatcatcgcccgcggggacaccgcggagtacgcgggc
cggcccgtccggcccgaggacgacggcatcaagcacacggcgccgcgcggaggtctgcgc
aacctcgacgcggtgttcccgggacggccgcgtcagccccggcgcagccgtgacggccgg
gcggtcacgcagctcgcgtacgcccgtcgcggggagatcacccccgagatggagttcgtg
gcgatccgggaggacgtcgaccccgaggtggtccgtgaggagatcgccgcgggccgggcg
gtcctgcccgccaacgtcaaccacccggagatcgagccgatgatcatcggcaagcggttc
ctggtgaaggtcaacgccaacatcggcaactcggcggtcacgtcctccatcgaggaggag
gtcgagaagatgacctgggcgacccgctggggcgccgacacggtcatggacctctccacc
ggccgcaacatccacaccacgcgcgagtgggtgctgcgcaactcccccgtgcccatcggc
acggtgccgctctaccaggcgctggagaaggtcgacggcaaggccgaggaactgacctgg
gagatctacaaggacacggtcatcgagcaggccgagcagggcgtggactacatgacggtc
catgcgggcgtgcggctgccgtacgtgccgctgaccgcgaaccgcaagacgggcatcgtc
tcgcgcggcggctcgatcatggccgcgtggtgcctggcgcaccacaaggagaacttcctg
tacgagaacttcgaggagctctgcgagatcctcgccgcctacgacgtgacgtactcgctc
ggcgacggcctgcggccggggtcgatcgcggacgccaacgacgaggcgcagttcgcggag
ttgaggacgctcggcgaactcaacaccatcgccaagcggttcaacgtgcagaccatgatc
gagggcccgggacacgtcccgatgcacaagatcaaggagaacatcgaccttcagcaggag
atctgcgaagaggccccgttctacacgctcggcccgctgacgacggacgtggctccggcc
tacgaccacatcacctcgggcatcggcgccgcgatgatcgcctggtggggcacggcgatg
ctctgctacgtgacgcccaaggagcacctgggcctgcccaaccgcgacgacgtcaagacc
ggcgtcatcacctacaagatcgccgcccacgccgccgacctcgccaagggccaccccggc
gcccaggagtgggacgacgcgctgtccgacgcccgcttcgagttccgatgggaggaccag
ttcaacctggcgctcgacccggacacggcccgcgagttccacgacgagacgctcccggcg
gagccggcgaagacggcgcacttctgctccatgtgcgggccgaagttctgctcgatgaag
atctcccaggacatccgccgccggcacggaggcacccaggaggagatcgagggcgagatc
gagcagggcatggcccagaagtcgaaggagttcgcggcagcgggcaacagggtgtacctg
cccctggcggactga
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