Streptomyces nigra: DC008_17590
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Entry
DC008_17590 CDS
T05839
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snz03032
]
DC008_17590 (gyrB)
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_17590 (gyrB)
Enzymes [BR:
snz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DC008_17590 (gyrB)
DNA replication proteins [BR:
snz03032
]
Prokaryotic type
DNA Topoisomerases
DC008_17590 (gyrB)
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DC008_17590 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AWE51329
LinkDB
All DBs
Position
3805356..3807440
Genome browser
AA seq
694 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTDAGADGAGASPSPEVTSSYDASAITVLEGLDAVRKRPG
MYIGSTGERGLHHLVQEVVDNSVDEALAGYADTIDVTILADGGVRVVDNGRGIPVGIVPS
EGKPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEVKTDGYRWTQDY
KLGVPTAPLARHEPTDEHGTSVTFWADPDIFETTEYSFETLSRRFQEMAFLNKGLRIRLT
DERESAKATSGADEAGADEKAEVKSVDYHYEGGIVDFVKYLNSRKGDVVHPTVIDLEAED
KDKLLSLEVAMQWNSSYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLRE
KDDNLTGDDIREGLTAIISVKLSEPQFEGQTKTKLGNTEVKTFVQKVVYEHLADWLDRNP
NEAADIIRKGIQAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVEG
DSAGGSAKSGRNPEYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIE
KLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDEVEY
AYSDRERDALLELGRQRGKRVREDSIQRFKGLGEMNAEELRVTTMDQEHRVLGQVTLDDA
AQADDLFSVLMGEDVEARRQFIQRNAKDVRFLDI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacattccg
tccaccgacgccggcgccgacggcgcgggcgcttcgccgagccccgaggtcacctcctcg
tacgacgcgagcgccatcaccgtcctcgagggcctggacgcggttcgcaagcgacccggt
atgtacatcggttcgaccggcgagcgcggactgcaccacctcgtgcaagaggtcgtcgac
aactccgtcgacgaggcactggccggttacgcggacacgatcgacgtgacgatcctggcc
gacggcggtgtccgcgtcgtcgacaacggccgaggcatcccggtgggcatcgtcccgtcc
gagggcaagccggccgtcgaggtcgtcctgaccgtgctgcacgcgggcggcaagttcggc
ggcggtggctacgcggtctccggcggtctgcacggcgtcggcgtgtccgtggtgaacgcc
ctgtccaccaaggtcgccgtcgaggtcaagacggacggctaccgctggacgcaggactac
aagctcggcgtcccgaccgccccgctcgccaggcacgagcccaccgatgagcacggcacg
tcggtcaccttctgggccgacccggacatcttcgagaccaccgagtactccttcgagacg
ctctcgcggcgcttccaggagatggcgttcctcaacaagggcctgcgcatccggctcacc
gacgagcgcgagtctgcgaaggcgacctccggtgcggacgaggctggcgccgacgagaag
gccgaggtcaagtcggtcgactaccactacgagggcggcatcgtcgacttcgtgaagtac
ctcaactcccgcaagggggacgtggtgcaccccaccgtcatcgacctggaggcggaggac
aaggacaagctcctgtccctcgaggtcgcgatgcagtggaacagcagctacaccgagggc
gtctactccttcgcgaacatcatccacacccacgagggcggtacgcacgaagagggcttc
cgcgccgcgctgacctcgctgatcaacaagtacgcgcgcgacaagaagctgctgcgcgag
aaggacgacaacctcacgggcgacgacatccgcgagggcctgacggcgatcatctcggtc
aagctgagcgagcctcagttcgagggccagaccaagacgaagctgggcaacaccgaggtg
aagaccttcgtccagaaggtcgtctacgagcacctggcggactggttggaccgcaacccc
aacgaggccgcggacatcatccgcaagggcatccaggccgccaccgcgcgcgtggccgcc
cgcaaggcgcgcgatctgacgcgccgcaagggcctgctggagaccgcgtccctgccgggc
aagctctccgactgccagtcgaacgaccccaccaagtgcgagatcttcatcgtcgagggt
gactccgccggcggctcggccaagtccggccgcaacccggagtaccaggcgatcctcccg
atccgcggcaagatcctcaacgtcgagaaggcgcggatcgacaagatcctgcagaaccag
gagatccaggcgctgatctcggccttcggcaccggtgtgcacgaggacttcgacatcgag
aagctgcgctatcacaagatcatcctgatggcggacgccgacgtcgacggccagcacatc
aacaccctgctgctgacgttcctgttccgcttcatgcgtccgctggtcgaggccgggcac
gtcttcctgtcccgtccgccgctctacaagatcaagtggggccgcgacgaggtggagtac
gcctactccgaccgtgagcgcgacgcgctgctggagctgggccgccagcgcggcaagcgg
gtccgtgaggactccatccagcgcttcaagggtctcggcgagatgaacgccgaggagctg
cgtgtgacgaccatggaccaggagcaccgcgtcctcggccaggtcacgctcgacgacgcc
gcccaggccgacgacctgttctcggtcctgatgggcgaggacgtcgaggcccggcgccag
ttcatccagcgcaacgccaaggacgtccgcttcctcgacatctga
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