KEGG   Streptomyces nigra: DC008_18875
Entry
DC008_18875       CDS       T05839                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K28147  ribonuclease VapC2/6/11/15/17/18/21/51 [EC:3.1.-.-]
Organism
snz  Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:snz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:snz02048]
    DC008_18875
Prokaryotic defense system [BR:snz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DC008_18875
SSDB
Motif
Pfam: PIN DUF5615 DUF4093
Other DBs
NCBI-ProteinID: AWE51549
LinkDB
Position
4071372..4071779
AA seq 135 aa
MSVPDYLIDTSALARILLRRTTEEWEQRMAAGLVALCDLTELELLYSARSAKDREALQER
LDQFAWCPMPDGIHRRARVVQRELTAKGEHRSAGAIDLLVAAAAEEAGLTLLHHDRDFET
IARTTGQPVHMIDLK
NT seq 408 nt   +upstreamnt  +downstreamnt
gtgagcgtgcccgactacctgatcgacacgtcagccctggcccgcatcctcctccgtcgg
acgacggaggagtgggagcagcgcatggcggccgggctggtcgccctgtgcgacctcacg
gagctggaactgctctactccgcacgttccgcgaaagatcgtgaagcactccaggaacga
ctggaccagttcgcctggtgccccatgcccgacggcatccaccggcgcgctcgcgtcgtc
cagcgcgagctgacagccaagggagagcaccgcagcgccggagccatcgaccttctcgtg
gcggcagcagcggaggaagccggcctcacgctgctgcatcacgaccgcgacttcgagacc
atcgcccgcaccaccggccagccggtccacatgatcgacctgaagtag

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